Difference between revisions of "FASYN-INITIAL-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6601 RXN-6601] == * direction: ** LEFT-TO-RIGHT * common name: ** gamma-glutamyl_transferase *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6601 RXN-6601] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33084 TAX-33084]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** gamma-glutamyl_transferase
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** superpathway of fatty acid biosynthesis initiation (E. coli)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.2.2 EC-2.3.2.2]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''8''' reactions in the full pathway
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** 1 [[Amino-Acids-20]][c] '''+''' 1 [[GLUTATHIONE]][c] '''=>''' 1 [[5-L-GLUTAMYL-L-AMINO-ACID]][c] '''+''' 1 [[CYS-GLY]][c]
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* [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
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* With common name(s):
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** 9 associated gene(s):
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** 1 a proteinogenic amino acid[c] '''+''' 1 glutathione[c] '''=>''' 1 an (γ-L-glutamyl)-L-amino acid[c] '''+''' 1 L-cysteinyl-glycine[c]
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*** [[Tiso_gene_5939]]
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*** [[Tiso_gene_500]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_14485]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_13394]]
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* [[Tiso_gene_12321]]
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*** [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_15991]]
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_135]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_19302]]
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== Pathways  ==
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*** [[Tiso_gene_10876]]
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* [[PWY-4041]], γ-glutamyl cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4041 PWY-4041]
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** 6 reconstruction source(s) associated:
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** '''5''' reactions found over '''6''' reactions in the full pathway
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*** [[annotation-experimental_annotation]]
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== Reconstruction information  ==
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*** [[orthology-esiliculosus]]
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* [[orthology]]:
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]:
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*** [[orthology-athaliana]]
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*** [[esiliculosus]]
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*** [[orthology-synechocystis]]
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* [[annotation]]:
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*** [[manual-primary_network]]
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** [[pathwaytools]]:
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* [[ACP-S-ACETYLTRANSFER-RXN]]
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*** [[in-silico_annotation]]
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** 6 associated gene(s):
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*** [[Tiso_gene_15991]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_500]]
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*** [[Tiso_gene_10876]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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* [[PWY-4381]]
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** 0 associated gene:
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* [[PWY-5965]]
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** 0 associated gene:
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* [[PWY-5966]]
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** 0 associated gene:
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: common name=gamma-glutamyl_transferase}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY]
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{{#set: ec number=EC-2.3.2.2}}
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{{#set: taxonomic range=TAX-33084}}
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{{#set: gene associated=Tiso_gene_12321}}
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{{#set: taxonomic range=TAX-33208}}
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{{#set: in pathway=PWY-4041}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: reconstruction category=orthology}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: common name=superpathway of fatty acid biosynthesis initiation (E. coli)}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reaction found=5}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=8}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: completion rate=63.0}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:35, 21 March 2018

Pathway FASYN-INITIAL-PWY

Reaction(s) found

5 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links





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