Difference between revisions of "GLUTDEG-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEG-PWY GLUTDEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEG-PWY GLUTDEG-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** pyrroline-5-carboxylate_reductase
+
** L-glutamate degradation II
−
** ORF
+
−
** ankyrin_repeat-containing_protein
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** L-aspartate degradation
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''1''' reactions found over '''2''' reactions in the full pathway
−
** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
* [[ASPAMINOTRANS-RXN]]
−
* With common name(s):
+
** 6 associated gene(s):
−
** 1 NAD(P)H[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 2 H+[c] '''=>''' 1 L-proline[c] '''+''' 1 NAD(P)+[c]
+
*** [[Tiso_gene_17718]]
−
 
+
*** [[Tiso_gene_6815]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_13538]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_15680]]
−
* [[Tiso_gene_8625]]
+
*** [[Tiso_gene_17809]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_12889]]
−
***EC-NUMBER
+
** 7 reconstruction source(s) associated:
−
** EXPERIMENTAL_ANNOTATION
+
*** [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_19254]]
+
*** [[orthology-athaliana]]
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-synechocystis]]
−
***EC-NUMBER
+
*** [[manual-primary_network]]
−
* [[Tiso_gene_17059]]
+
*** [[orthology-creinhardtii]]
−
** IN-SILICO_ANNOTATION
+
== Reaction(s) not found ==
−
***EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=ASPARTASE-RXN ASPARTASE-RXN]
−
* [[Tiso_gene_20218]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
+
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* ECOCYC:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLUTDEG-PWY GLUTDEG-PWY]
−
** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251]
+
{{#set: taxonomic range=TAX-2}}
−
* UNIPROT:
+
{{#set: common name=L-glutamate degradation II}}
−
** [http://www.uniprot.org/uniprot/P32322 P32322]
+
{{#set: common name=L-aspartate degradation}}
−
** [http://www.uniprot.org/uniprot/P27771 P27771]
+
{{#set: reaction found=1}}
−
** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7]
+
{{#set: total reaction=2}}
−
** [http://www.uniprot.org/uniprot/P14383 P14383]
+
{{#set: completion rate=50.0}}
−
** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8]
+
−
** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2]
+
−
** [http://www.uniprot.org/uniprot/Q12740 Q12740]
+
−
** [http://www.uniprot.org/uniprot/P22008 P22008]
+
−
** [http://www.uniprot.org/uniprot/P54904 P54904]
+
−
** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8]
+
−
** [http://www.uniprot.org/uniprot/P17817 P17817]
+
−
** [http://www.uniprot.org/uniprot/P32263 P32263]
+
−
** [http://www.uniprot.org/uniprot/Q12641 Q12641]
+
−
** [http://www.uniprot.org/uniprot/P46725 P46725]
+
−
** [http://www.uniprot.org/uniprot/P74572 P74572]
+
−
** [http://www.uniprot.org/uniprot/Q04708 Q04708]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=pyrroline-5-carboxylate_reductase}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=ankyrin_repeat-containing_protein}}
+
−
{{#set: ec number=EC-1.5.1.2}}
+
−
{{#set: gene associated=Tiso_gene_8625|Tiso_gene_19254|Tiso_gene_17059|Tiso_gene_20218}}
+
−
{{#set: in pathway=PROSYN-PWY|ARG-PRO-PWY|PWY-6344|PWY-4981|PWY-3341}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:06, 21 March 2018

Pathway GLUTDEG-PWY

  • taxonomic range:
  • common name:
    • L-glutamate degradation II
  • Synonym(s):
    • L-aspartate degradation

Reaction(s) found

1 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLUTDEG-PWY&oldid=39518"