Difference between revisions of "GLYCEROL-3P"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAM-RXN PSERTRANSAM-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** phosphoseri...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-CYTIDINE-5-DIPHOSPHO-2-C 4-CYTIDINE-5-DIPHOSPHO-2-C] == * smiles: ** CC(O)(CO)C(O)COP(OP([O-]...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAM-RXN PSERTRANSAM-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-CYTIDINE-5-DIPHOSPHO-2-C 4-CYTIDINE-5-DIPHOSPHO-2-C] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CC(O)(CO)C(O)COP(OP([O-])(=O)OCC2(C(C(O)C(N1(C(N=C(C=C1)N)=O))O2)O))([O-])=O
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* inchi key:
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** InChIKey=YFAUKWZNPVBCFF-XHIBXCGHSA-L
 
* common name:
 
* common name:
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** ORF
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** 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
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** phosphoserine_aminotransferase
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* molecular weight:
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* ec number:
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** 519.295   
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** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52]
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* Synonym(s):
 
* Synonym(s):
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** CDP-ME
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** CDP-methyl-D-erythritol
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** 4-diphosphocytidyl-2C-methyl-D-erythritol
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** 4-diphosphocytidyl-2-C-methylerythritol
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[2.7.1.148-RXN]]
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** 1 [[3-P-SERINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[GLT]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[2.7.7.60-RXN]]
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** 1 3-phospho-L-serine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 3-phospho-hydroxypyruvate[c] '''+''' 1 L-glutamate[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17123]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15686]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14329 14329]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=24970669 24970669]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R04173 R04173]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57823 57823]
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* UNIPROT:
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* BIGG : 4c2me
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** [http://www.uniprot.org/uniprot/P10658 P10658]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P23721 P23721]
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** [http://www.genome.jp/dbget-bin/www_bget?C11435 C11435]
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** [http://www.uniprot.org/uniprot/Q9PIH3 Q9PIH3]
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{{#set: smiles=CC(O)(CO)C(O)COP(OP([O-])(=O)OCC2(C(C(O)C(N1(C(N=C(C=C1)N)=O))O2)O))([O-])=O}}
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** [http://www.uniprot.org/uniprot/Q9CHW5 Q9CHW5]
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{{#set: inchi key=InChIKey=YFAUKWZNPVBCFF-XHIBXCGHSA-L}}
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** [http://www.uniprot.org/uniprot/P44336 P44336]
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{{#set: common name=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol}}
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** [http://www.uniprot.org/uniprot/O34370 O34370]
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{{#set: molecular weight=519.295    }}
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** [http://www.uniprot.org/uniprot/P62676 P62676]
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{{#set: common name=CDP-ME|CDP-methyl-D-erythritol|4-diphosphocytidyl-2C-methyl-D-erythritol|4-diphosphocytidyl-2-C-methylerythritol}}
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** [http://www.uniprot.org/uniprot/P33330 P33330]
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{{#set: consumed by=2.7.1.148-RXN}}
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** [http://www.uniprot.org/uniprot/P19689 P19689]
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{{#set: produced by=2.7.7.60-RXN}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=ORF}}
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{{#set: common name=phosphoserine_aminotransferase}}
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{{#set: ec number=EC-2.6.1.52}}
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{{#set: gene associated=Tiso_gene_17123|Tiso_gene_15686}}
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{{#set: in pathway=SERSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:56, 18 March 2018

Metabolite 4-CYTIDINE-5-DIPHOSPHO-2-C

  • smiles:
    • CC(O)(CO)C(O)COP(OP([O-])(=O)OCC2(C(C(O)C(N1(C(N=C(C=C1)N)=O))O2)O))([O-])=O
  • inchi key:
    • InChIKey=YFAUKWZNPVBCFF-XHIBXCGHSA-L
  • common name:
    • 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
  • molecular weight:
    • 519.295
  • Synonym(s):
    • CDP-ME
    • CDP-methyl-D-erythritol
    • 4-diphosphocytidyl-2C-methyl-D-erythritol
    • 4-diphosphocytidyl-2-C-methylerythritol

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(O)(CO)C(O)COP(OP([O-])(=O)OCC2(C(C(O)C(N1(C(N=C(C=C1)N)=O))O2)O))([O-])=O" cannot be used as a page name in this wiki.




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