Difference between revisions of "GUANIDINOBUTYRASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7315 PWY-7315] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-12...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANIDINOBUTYRASE-RXN GUANIDINOBUTYRASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7315 PWY-7315] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANIDINOBUTYRASE-RXN GUANIDINOBUTYRASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** dTDP-N-acetylthomosamine biosynthesis
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** [http://enzyme.expasy.org/EC/3.5.3.7 EC-3.5.3.7]
 
* Synonym(s):
 
* Synonym(s):
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** dTDP-4-acetamido-α-D-fucose biosynthesis
 
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** dTDP-4-acetamido-4,6-dideoxy-α-D-galactose biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[DTDPGLUCDEHYDRAT-RXN]]
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** 1 [[CPD-592]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[UREA]][c] '''+''' 1 [[4-AMINO-BUTYRATE]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Tiso_gene_12394]]
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** 1 4-guanidinobutanoate[c] '''+''' 1 H2O[c] '''=>''' 1 urea[c] '''+''' 1 4-aminobutanoate[c]
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*** [[Tiso_gene_7329]]
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** 4 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_4415]]
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*** [[orthology-synechocystis]]
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** Source: [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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== Pathways  ==
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* [[DTDPGLUCOSEPP-RXN]]
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* [[PWY-7523]], L-arginine degradation XII: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7523 PWY-7523]
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** 1 associated gene(s):
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** '''1''' reactions found over '''4''' reactions in the full pathway
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*** [[Tiso_gene_14704]]
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* [[PWY-5742]], L-arginine degradation IX (arginine:pyruvate transaminase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5742 PWY-5742]
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** 1 reconstruction source(s) associated:
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** '''1''' reactions found over '''4''' reactions in the full pathway
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*** [[orthology-synechocystis]]
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* [[ARGDEG-V-PWY]], L-arginine degradation X (arginine monooxygenase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-V-PWY ARGDEG-V-PWY]
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== Reaction(s) not found ==
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RFFTRANS-RXN RFFTRANS-RXN]
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* [[ARGDEG-IV-PWY]], L-arginine degradation VIII (arginine oxidase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-IV-PWY ARGDEG-IV-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=TDPFUCACTRANS-RXN TDPFUCACTRANS-RXN]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7315 PWY-7315]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19501 19501]
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{{#set: taxonomic range=TAX-1224}}
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* LIGAND-RXN:
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{{#set: common name=dTDP-N-acetylthomosamine biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01990 R01990]
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{{#set: common name=dTDP-4-acetamido-α-D-fucose biosynthesis|dTDP-4-acetamido-4,6-dideoxy-α-D-galactose biosynthesis}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=2}}
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{{#set: ec number=EC-3.5.3.7}}
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{{#set: total reaction=4}}
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{{#set: gene associated=Tiso_gene_4415}}
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{{#set: completion rate=50.0}}
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{{#set: in pathway=PWY-7523|PWY-5742|ARGDEG-V-PWY|ARGDEG-IV-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:15, 21 March 2018

Reaction GUANIDINOBUTYRASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-guanidinobutanoate[c] + 1 H2O[c] => 1 urea[c] + 1 4-aminobutanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7523, L-arginine degradation XII: PWY-7523
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5742, L-arginine degradation IX (arginine:pyruvate transaminase pathway): PWY-5742
    • 1 reactions found over 4 reactions in the full pathway
  • ARGDEG-V-PWY, L-arginine degradation X (arginine monooxygenase pathway): ARGDEG-V-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • ARGDEG-IV-PWY, L-arginine degradation VIII (arginine oxidase pathway): ARGDEG-IV-PWY
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GUANIDINOBUTYRASE-RXN&oldid=40462"