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| − | [[Category:Reaction]] | + | {{#ask: [[Category:Reaction]] [[reconstruction source::gap-filling-gapfilling_solution_with_meneco_draft_medium]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINLYA-RXN ARGSUCCINLYA-RXN] ==
| + | | ?COMMON NAME |
| − | * direction:
| + | | ?ec number |
| − | ** REVERSIBLE
| + | | ?reconstruction category |
| − | * common name:
| + | | ?reconstruction tool |
| − | ** argininosuccinate_lyase
| + | | ?reconstruction source |
| − | * ec number:
| + | | ?reconstruction comment |
| − | ** [http://enzyme.expasy.org/EC/4.3.2.1 EC-4.3.2.1]
| + | | ?gene associated |
| − | * Synonym(s):
| + | | ?in pathway |
| − | | + | }} |
| − | == Reaction Formula ==
| + | |
| − | * With identifiers:
| + | |
| − | ** 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[ARG]][c] '''+''' 1 [[FUM]][c]
| + | |
| − | * With common name(s):
| + | |
| − | ** 1 L-arginino-succinate[c] '''<=>''' 1 L-arginine[c] '''+''' 1 fumarate[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * Gene: [[Tiso_gene_2485]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | ** Source: [[orthology-synechocystis]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | ** Source: [[orthology-creinhardtii]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
| + | |
| − | ** '''7''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
| + | |
| − | ** '''5''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | * [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
| + | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | * [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
| + | |
| − | ** '''9''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY-4983]], L-citrulline-nitric oxide cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4983 PWY-4983]
| + | |
| − | ** '''2''' reactions found over '''3''' reactions in the full pathway
| + | |
| − | * [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
| + | |
| − | ** '''7''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-athaliana]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-creinhardtii]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-synechocystis]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[manual]]
| + | |
| − | ** Source: [[manual-primary_network]]
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| − | == External links ==
| + | |
| − | * RHEA:
| + | |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24020 24020]
| + | |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P50987 P50987]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q46104 Q46104]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P11447 P11447]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P44314 P44314]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q58201 Q58201]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P33110 P33110]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q01592 Q01592]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P40369 P40369]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P50988 P50988]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P73257 P73257]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P50514 P50514]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P04076 P04076]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P04424 P04424]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P20673 P20673]
| + | |
| − | {{#set: direction=REVERSIBLE}}
| + | |
| − | {{#set: common name=argininosuccinate_lyase}}
| + | |
| − | {{#set: ec number=EC-4.3.2.1}}
| + | |
| − | {{#set: gene associated=Tiso_gene_2485}}
| + | |
| − | {{#set: in pathway=PWY-5154|ARGSYN-PWY|PWY-4984|ARGSYNBSUB-PWY|PWY-4983|PWY-7400}}
| + | |
| − | {{#set: reconstruction category=orthology|manual|annotation}}
| + | |
| − | {{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
