Difference between revisions of "HACD5m"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CARBOXYMETHYL-HYDROXYPHENYLPROPCOA CARBOXYMETHYL-HYDROXYPHENYLPROPCOA] == * smiles: ** CC(C)(C(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.8-RXN 1.5.1.8-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CARBOXYMETHYL-HYDROXYPHENYLPROPCOA CARBOXYMETHYL-HYDROXYPHENYLPROPCOA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.8-RXN 1.5.1.8-RXN] ==
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* smiles:
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* direction:
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** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(C(CC([O-])=O)C(O)C1(=CC=CC=C1))=O)COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=DVSQFPLMOLPRDU-ACXVELPGSA-I
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** [http://enzyme.expasy.org/EC/1.5.1.8 EC-1.5.1.8]
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* common name:
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** 2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA
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* molecular weight:
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** 968.692   
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* Synonym(s):
 
* Synonym(s):
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** (hydroxymethylphenyl)succinyl-CoA
 
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** 2-carboxymethyl-3-hydroxyphenylpropionyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-905]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[PROTON]][c] '''+''' 1 [[LYS]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[SACCHAROPINE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 H+[c] '''+''' 1 L-lysine[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 NADPH[c] '''=>''' 1 L-saccharopine[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_1156]]
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** Source: [[orthology-athaliana]]
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== Pathways  ==
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* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-DEG1-PWY LYSINE-DEG1-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90658758 90658758]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19375 19375]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=28202 28202]
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** [http://www.genome.jp/dbget-bin/www_bget?R00716 R00716]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C09819 C09819]
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** [http://www.uniprot.org/uniprot/Q9SMZ4 Q9SMZ4]
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* HMDB : HMDB12145
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: smiles=CC(C)(C(O)C(=O)NCCC(=O)NCCSC(C(CC([O-])=O)C(O)C1(=CC=CC=C1))=O)COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-]}}
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{{#set: ec number=EC-1.5.1.8}}
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{{#set: inchi key=InChIKey=DVSQFPLMOLPRDU-ACXVELPGSA-I}}
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{{#set: gene associated=Tiso_gene_1156}}
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{{#set: common name=2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA}}
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{{#set: in pathway=LYSINE-DEG1-PWY}}
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{{#set: molecular weight=968.692    }}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: common name=(hydroxymethylphenyl)succinyl-CoA|2-carboxymethyl-3-hydroxyphenylpropionyl-CoA}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
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{{#set: consumed by=RXN-905}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:55, 21 March 2018

Reaction 1.5.1.8-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 L-lysine[c] + 1 2-oxoglutarate[c] + 1 NADPH[c] => 1 L-saccharopine[c] + 1 NADP+[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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