Difference between revisions of "HOMOSERKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERKIN-RXN HOMOSERKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** homoserine_kinase...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5139 PWY-5139] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOSERKIN-RXN HOMOSERKIN-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** pelargonidin conjugates biosynthesis
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** homoserine_kinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.39 EC-2.7.1.39]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[RXN-7828]]
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** 1 [[ATP]][c] '''+''' 1 [[HOMO-SER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7830 RXN-7830]
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** 1 ATP[c] '''+''' 1 L-homoserine[c] '''=>''' 1 ADP[c] '''+''' 1 O-phospho-L-homoserine[c] '''+''' 1 H+[c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7832 RXN-7832]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7834 RXN-7834]
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7997 RXN-7997]
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7998 RXN-7998]
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* Gene: [[Tiso_gene_17705]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_17704]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-3398}}
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* RHEA:
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{{#set: common name=pelargonidin conjugates biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13985 13985]
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{{#set: reaction found=1}}
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* LIGAND-RXN:
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{{#set: reaction not found=6}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01771 R01771]
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{{#set: completion rate=17.0}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P27722 P27722]
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** [http://www.uniprot.org/uniprot/Q9PIZ3 Q9PIZ3]
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** [http://www.uniprot.org/uniprot/P04948 P04948]
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** [http://www.uniprot.org/uniprot/Q9UZV7 Q9UZV7]
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** [http://www.uniprot.org/uniprot/Q9CGD7 Q9CGD7]
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** [http://www.uniprot.org/uniprot/P44504 P44504]
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** [http://www.uniprot.org/uniprot/P52991 P52991]
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** [http://www.uniprot.org/uniprot/P00547 P00547]
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** [http://www.uniprot.org/uniprot/P07128 P07128]
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** [http://www.uniprot.org/uniprot/P17423 P17423]
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** [http://www.uniprot.org/uniprot/P73646 P73646]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=homoserine_kinase}}
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{{#set: ec number=EC-2.7.1.39}}
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{{#set: gene associated=Tiso_gene_17705|Tiso_gene_17704}}
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{{#set: in pathway=PWY-702|HOMOSER-THRESYN-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:11, 21 March 2018

Reaction HOMOSERKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • homoserine_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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