Difference between revisions of "ILEUDEG-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN] == * direction: ** L...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN TRNA-GUANINE-N7--METHYLTRANSFERASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** ORF
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** L-isoleucine degradation I
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** trna_(guanine-n-)-methyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.33 EC-2.1.1.33]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''6''' reactions in the full pathway
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** 1 [[Guanine46-in-tRNA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[tRNA-Containing-N7-Methylguanine-46]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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* [[2KETO-3METHYLVALERATE-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 a guanine46 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 an N7-methylguanine46 in tRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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*** [[Tiso_gene_3260]]
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*** [[Tiso_gene_18084]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_11793]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_17963]]
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*** [[orthology-creinhardtii]]
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** IN-SILICO_ANNOTATION
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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***EC-NUMBER
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** 3 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_14984]]
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* [[Tiso_gene_14922]]
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*** [[Tiso_gene_18403]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_17748]]
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***EC-NUMBER
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** 7 reconstruction source(s) associated:
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_5561]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[orthology-athaliana]]
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* [[Tiso_gene_6175]]
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*** [[orthology-synechocystis]]
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** IN-SILICO_ANNOTATION
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*** [[manual-primary_network]]
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***EC-NUMBER
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*** [[orthology-creinhardtii]]
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== Pathways  ==
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* [[METHYLACETOACETYLCOATHIOL-RXN]]
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== Reconstruction information  ==
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** 3 associated gene(s):
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* [[orthology]]:
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*** [[Tiso_gene_16181]]
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** [[pantograph]]:
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*** [[Tiso_gene_17451]]
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*** [[esiliculosus]]
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*** [[Tiso_gene_15327]]
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* [[annotation]]:
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** 2 reconstruction source(s) associated:
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** [[pathwaytools]]:
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*** [[orthology-athaliana]]
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*** [[in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[TIGLYLCOA-HYDROXY-RXN]]
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** 5 associated gene(s):
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*** [[Tiso_gene_14257]]
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_6885]]
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*** [[Tiso_gene_5857]]
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*** [[Tiso_gene_16145]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.178-RXN 1.1.1.178-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=2-METHYLACYL-COA-DEHYDROGENASE-RXN 2-METHYLACYL-COA-DEHYDROGENASE-RXN]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00600 R00600]
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{{#set: taxonomic range=TAX-2157}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=ORF}}
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{{#set: common name=L-isoleucine degradation I}}
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{{#set: common name=trna_(guanine-n-)-methyltransferase}}
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{{#set: reaction found=4}}
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{{#set: ec number=EC-2.1.1.33}}
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{{#set: total reaction=6}}
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{{#set: gene associated=Tiso_gene_17963|Tiso_gene_14922|Tiso_gene_5561|Tiso_gene_6175}}
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{{#set: completion rate=67.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:35, 21 March 2018

Pathway ILEUDEG-PWY

Reaction(s) found

4 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ILEUDEG-PWY&oldid=42577"