Difference between revisions of "KETOACYLCOATHIOL-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_1462 == * right end position: ** 10587 * transcription direction: ** POSITIVE * left end position: ** 8805 * centisome position: ** 37.1331...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** thiol...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_1462 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] ==
−
* right end position:
+
* direction:
−
** 10587
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** thiolase
−
* left end position:
+
** acetyl-_c-acetyltransferase
−
** 8805
+
** 3-ketoacyl-_thiolase
−
* centisome position:
+
* ec number:
−
** 37.1331   
+
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
 +
** Beta-ketothiolase
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[ASNSYNA-RXN]]
+
* With identifiers:
 +
** 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[ACETYL-COA]][c]
 +
* With common name(s):
 +
** 1 a 3-oxoacyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 acetyl-CoA[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_10116]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17451]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3856]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3855]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_15327]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: ec-number
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
−
* [[ASPARAGINESYN-PWY]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=10587}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21564 21564]
−
{{#set: left end position=8805}}
+
* PIR:
−
{{#set: centisome position=37.1331    }}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAB XURTAB]
−
{{#set: reaction associated=ASNSYNA-RXN}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAA XURTAA]
−
{{#set: pathway associated=ASPARAGINESYN-PWY}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURT XURT]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUHUAB XUHUAB]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUEC XUEC]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52165 T52165]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52110 T52110]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07989 T07989]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72532 S72532]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57792 S57792]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36838 S36838]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33637 S33637]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S22784 S22784]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JS0624 JS0624]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64890 H64890]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00391 R00391]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P77525 P77525]
 +
** [http://www.uniprot.org/uniprot/P28790 P28790]
 +
** [http://www.uniprot.org/uniprot/P27796 P27796]
 +
** [http://www.uniprot.org/uniprot/Q08375 Q08375]
 +
** [http://www.uniprot.org/uniprot/Q05493 Q05493]
 +
** [http://www.uniprot.org/uniprot/Q42918 Q42918]
 +
** [http://www.uniprot.org/uniprot/Q43742 Q43742]
 +
** [http://www.uniprot.org/uniprot/Q56WD9 Q56WD9]
 +
** [http://www.uniprot.org/uniprot/Q570C8 Q570C8]
 +
** [http://www.uniprot.org/uniprot/P21151 P21151]
 +
** [http://www.uniprot.org/uniprot/P09110 P09110]
 +
** [http://www.uniprot.org/uniprot/P13437 P13437]
 +
** [http://www.uniprot.org/uniprot/P21775 P21775]
 +
** [http://www.uniprot.org/uniprot/P07871 P07871]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=thiolase}}
 +
{{#set: common name=acetyl-_c-acetyltransferase}}
 +
{{#set: common name=3-ketoacyl-_thiolase}}
 +
{{#set: ec number=EC-2.3.1.16}}
 +
{{#set: common name=Beta-ketothiolase}}
 +
{{#set: gene associated=Tiso_gene_10116|Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_3855|Tiso_gene_15327}}
 +
{{#set: in pathway=PWY-5136|PWY-7288|FAO-PWY|PWY66-391}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:24, 21 March 2018

Reaction KETOACYLCOATHIOL-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiolase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):
    • Beta-ketothiolase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7288, fatty acid β-oxidation (peroxisome, yeast): PWY-7288
    • 3 reactions found over 5 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=KETOACYLCOATHIOL-RXN&oldid=48457"