Difference between revisions of "LEUSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.21.3.1-RXN 1.21.3.1-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Gene == Gene Tiso_gene_15067 == * right end position: ** 5231 * transcription direction: ** NEGATIVE * left end position: ** 496 * centisome position: ** 9.435039...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.21.3.1-RXN 1.21.3.1-RXN] ==
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== Gene Tiso_gene_15067 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5231
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.21.3.1 EC-1.21.3.1]
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** NEGATIVE
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* left end position:
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** 496
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* centisome position:
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** 9.435039   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.2.1.21-RXN]]
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** 1 [[N-5S-5-AMINO-5-CARBOXYPENTANOYL-L-CY]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[ISOPENICILLIN-N]][c] '''+''' 2 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine[c] '''+''' 1 oxygen[c] '''=>''' 1 isopenicillin N[c] '''+''' 2 H2O[c]
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* Reaction: [[RXN-10769]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10773]]
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* [[Tiso_gene_3330]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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== Pathways ==
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* Reaction: [[RXN-13602]]
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* [[PWY-5629]], isopenicillin N biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5629 PWY-5629]
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** Source: [[annotation-in-silico_annotation]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN-13603]]
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* Category: [[orthology]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Assignment: ec-number
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-14179]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-5341]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-8036]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9674]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-3121]]
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* [[PWY-6002]]
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* [[PWY-6788]]
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* [[PWY-5176]]
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* [[PWY-7092]]
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* [[PWY-7091]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=5231}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22428 22428]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=496}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04872 R04872]
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{{#set: centisome position=9.435039    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
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{{#set: ec number=EC-1.21.3.1}}
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{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091}}
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{{#set: gene associated=Tiso_gene_3330}}
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{{#set: in pathway=PWY-5629}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 15:51, 21 March 2018

Gene Tiso_gene_15067

  • right end position:
    • 5231
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 496
  • centisome position:
    • 9.435039
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=LEUSYN-PWY&oldid=30701"