Difference between revisions of "LYSINE-AMINOAD-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-AMINOAD-PWY LYSINE-AMINOAD-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?ob...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-AMINOAD-PWY LYSINE-AMINOAD-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://enzyme.expasy.org/EC/1.14.13.11 EC-1.14.13.11]
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* common name:
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** L-lysine biosynthesis IV
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''9''' reactions in the full pathway
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-674]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[COUMARATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c]
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* [[1.5.1.7-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 oxygen[c] '''+''' 1 trans-cinnamate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 4-coumarate[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c]
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*** [[Tiso_gene_1156]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[2-AMINOADIPATE-AMINOTRANSFERASE-RXN]]
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* Gene: [[Tiso_gene_1547]]
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** 0 associated gene:
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** Source: [[orthology-athaliana]]
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** 1 reconstruction source(s) associated:
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* Gene: [[Tiso_gene_8263]]
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*** [[annotation-in-silico_annotation]]
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** Source: [[orthology-athaliana]]
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* [[HOMOACONITATE-HYDRATASE-RXN]]
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== Pathways  ==
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** 1 associated gene(s):
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* [[PWY1F-467]], phenylpropanoid biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467]
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*** [[Tiso_gene_12778]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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*** [[orthology-esiliculosus]]
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** '''9''' reactions found over '''19''' reactions in the full pathway
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== Reaction(s) not found ==
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=HOMOCITRATE-SYNTHASE-RXN HOMOCITRATE-SYNTHASE-RXN]
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* Category: [[orthology]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16757 RXN-16757]
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** Source: [[orthology-athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16758 RXN-16758]
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*** Tool: [[pantograph]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7970 RXN-7970]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-127 RXN3O-127]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1983 RXN3O-1983]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-33682}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10608 10608]
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{{#set: taxonomic range=TAX-4751}}
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* LIGAND-RXN:
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{{#set: common name=L-lysine biosynthesis IV}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02253 R02253]
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{{#set: reaction found=3}}
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* UNIPROT:
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{{#set: total reaction=9}}
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** [http://www.uniprot.org/uniprot/Q04468 Q04468]
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{{#set: completion rate=33.0}}
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** [http://www.uniprot.org/uniprot/P37115 P37115]
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** [http://www.uniprot.org/uniprot/Q9S8R8 Q9S8R8]
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** [http://www.uniprot.org/uniprot/P48522 P48522]
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** [http://www.uniprot.org/uniprot/Q42895 Q42895]
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** [http://www.uniprot.org/uniprot/O81928 O81928]
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** [http://www.uniprot.org/uniprot/O24315 O24315]
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** [http://www.uniprot.org/uniprot/Q43033 Q43033]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.14.13.11}}
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{{#set: gene associated=Tiso_gene_1547|Tiso_gene_8263}}
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{{#set: in pathway=PWY1F-467|PWY-1121}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:09, 21 March 2018

Pathway LYSINE-AMINOAD-PWY

  • taxonomic range:
  • common name:
    • L-lysine biosynthesis IV
  • Synonym(s):

Reaction(s) found

3 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=LYSINE-AMINOAD-PWY&oldid=39789"