Difference between revisions of "MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4821 RXN-4821] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/3.5.9...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS] == * taxonomic range: ** [...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-4821 RXN-4821] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/3.5.99 EC-3.5.99]
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** protein N-glycosylation (eukaryotic, high mannose)
 
* Synonym(s):
 
* Synonym(s):
 +
** mannosyl-chito-dolichol biosynthesis
 +
** eukaryotic N-linked glycosylation
 +
** dolichyl-diphosphooligosaccharide biosynthesis and attachment
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''19''' reactions found over '''19''' reactions in the full pathway
** 1 [[WATER]][c] '''+''' 1 [[DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[L-ALPHA-AMINO-EPSILON-KETO-PIMELATE]][c]
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* [[2.4.1.117-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 H2O[c] '''+''' 1 (S)-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H+[c] '''<=>''' 1 L-&alpha;-amino-&epsilon;-keto-pimelate[c]
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*** [[Tiso_gene_8160]]
 
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** 3 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[orthology-athaliana]]
== Pathways  ==
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*** [[annotation-in-silico_annotation]]
* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
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*** [[orthology-esiliculosus]]
** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[2.4.1.119-RXN]]
== Reconstruction information  ==
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** 2 associated gene(s):
* Category: [[annotation]]
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*** [[Tiso_gene_26]]
** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_10448]]
*** Tool: [[pathwaytools]]
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** 3 reconstruction source(s) associated:
** Source: [[annotation-experimental_annotation]]
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*** [[annotation-experimental_annotation]]
*** Tool: [[pathwaytools]]
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*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[2.4.1.141-RXN]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
* [[2.4.1.142-RXN]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_8387]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[2.4.1.83-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_16772]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[2.7.8.15-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_1604]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-16592]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-16593]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-16594]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-5462]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_16872]]
 +
*** [[Tiso_gene_10734]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-5463]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-5464]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_15849]]
 +
*** [[Tiso_gene_15372]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-5466]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_8232]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-5467]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_8232]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-5468]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_8232]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-5469]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_8232]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-5470]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-5471]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-5472]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_15050]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-2759}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24797 24797]
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{{#set: common name=protein N-glycosylation (eukaryotic, high mannose)}}
* LIGAND-RXN:
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{{#set: common name=mannosyl-chito-dolichol biosynthesis|eukaryotic N-linked glycosylation|dolichyl-diphosphooligosaccharide biosynthesis and attachment}}
** [http://www.genome.jp/dbget-bin/www_bget?R04336 R04336]
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{{#set: reaction found=19}}
{{#set: direction=REVERSIBLE}}
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{{#set: total reaction=19}}
{{#set: ec number=EC-3.5.99}}
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{{#set: completion rate=100.0}}
{{#set: in pathway=PWY-2942}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:18, 21 March 2018

Pathway MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS

  • taxonomic range:
  • common name:
    • protein N-glycosylation (eukaryotic, high mannose)
  • Synonym(s):
    • mannosyl-chito-dolichol biosynthesis
    • eukaryotic N-linked glycosylation
    • dolichyl-diphosphooligosaccharide biosynthesis and attachment

Reaction(s) found

19 reactions found over 19 reactions in the full pathway

Reaction(s) not found

External links