Difference between revisions of "MG-PROTOPORPHYRIN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12878 RXN-12878] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin-dependent_glutam...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=MG-PROTOPORPHYRIN MG-PROTOPORPHYRIN] == * smiles: ** C=CC2(C(C)=C4(C=C8(C(C)=C(CCC(=O)[O-])C7(=...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12878 RXN-12878] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=MG-PROTOPORPHYRIN MG-PROTOPORPHYRIN] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C=CC2(C(C)=C4(C=C8(C(C)=C(CCC(=O)[O-])C7(=N([Mg]35(N1(=C(C(C=C)=C(C)C1=CC=2N34)C=C6(C(C)=C(CCC(=O)[O-])C(N56)=C7))))8))))
 
* common name:
 
* common name:
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** ferredoxin-dependent_glutamate_synthase
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** Mg-protoporphyrin
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* molecular weight:
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** 582.94   
 
* Synonym(s):
 
* Synonym(s):
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** Mg-protoporphyrin IX
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** magnesium protoporphyrin
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** MgP
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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** 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN1F-20]]
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** 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 H2O[c] '''+''' 1 L-glutamate[c] '''=>''' 1 2-oxoglutarate[c] '''+''' 1 ammonium[c] '''+''' 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_1773]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_1154]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_2581]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R10086 R10086]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657481 90657481]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEBI:
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{{#set: common name=ferredoxin-dependent_glutamate_synthase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=60492 60492]
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{{#set: gene associated=Tiso_gene_1773|Tiso_gene_1154|Tiso_gene_2581}}
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* LIGAND-CPD:
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{{#set: in pathway=}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03516 C03516]
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: smiles=C=CC2(C(C)=C4(C=C8(C(C)=C(CCC(=O)[O-])C7(=N([Mg]35(N1(=C(C(C=C)=C(C)C1=CC=2N34)C=C6(C(C)=C(CCC(=O)[O-])C(N56)=C7))))8))))}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: common name=Mg-protoporphyrin}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: molecular weight=582.94    }}
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{{#set: common name=Mg-protoporphyrin IX|magnesium protoporphyrin|MgP}}
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{{#set: consumed by=RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN}}
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{{#set: produced by=RXN1F-20}}

Latest revision as of 21:24, 21 March 2018

Metabolite MG-PROTOPORPHYRIN

  • smiles:
    • C=CC2(C(C)=C4(C=C8(C(C)=C(CCC(=O)[O-])C7(=N([Mg]35(N1(=C(C(C=C)=C(C)C1=CC=2N34)C=C6(C(C)=C(CCC(=O)[O-])C(N56)=C7))))8))))
  • common name:
    • Mg-protoporphyrin
  • molecular weight:
    • 582.94
  • Synonym(s):
    • Mg-protoporphyrin IX
    • magnesium protoporphyrin
    • MgP

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C=CC2(C(C)=C4(C=C8(C(C)=C(CCC(=O)[O-])C7(=N([Mg]35(N1(=C(C(C=C)=C(C)C1=CC=2N34)C=C6(C(C)=C(CCC(=O)[O-])C(N56)=C7))))8))))" cannot be used as a page name in this wiki.



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