Difference between revisions of "Manual"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17875 RXN-17875] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopeptidase *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11056 RXN-11056] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17875 RXN-17875] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11056 RXN-11056] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** methionine_aminopeptidase
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18]
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** [http://enzyme.expasy.org/EC/1.14.14.1 EC-1.14.14.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[WATER]][c] '''+''' 1 [[L-methionyl-glycyl-Protein]][c] '''=>''' 1 [[N-terminal-glycine]][c] '''+''' 1 [[MET]][c]
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** 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[N-ACETYL-5-METHOXY-TRYPTAMINE]][c] '''=>''' 1 [[CPD-12014]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c]
 
* With common name(s):
 
* With common name(s):
** 1 H2O[c] '''+''' 1 an N-terminal-L-methionyl-glycyl-[protein][c] '''=>''' 1 an N-terminal glycyl-[protein][c] '''+''' 1 L-methionine[c]
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** 1 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 oxygen[c] '''+''' 1 melatonin[c] '''=>''' 1 6-hydroxymelatonin[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized [NADPH-hemoprotein reductase][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_4247]]
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* Gene: [[Tiso_gene_1035]]
** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_5715]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
 
== Pathways  ==
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
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* [[PWY-6398]], melatonin degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6398 PWY-6398]
** '''21''' reactions found over '''21''' reactions in the full pathway
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[annotation]]
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* Category: [[orthology]]
** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
*** Tool: [[pathwaytools]]
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*** Tool: [[pantograph]]
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=methionine_aminopeptidase}}
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{{#set: ec number=EC-1.14.14.1}}
{{#set: ec number=EC-3.4.11.18}}
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{{#set: gene associated=Tiso_gene_1035}}
{{#set: gene associated=Tiso_gene_4247|Tiso_gene_5715}}
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{{#set: in pathway=PWY-6398}}
{{#set: in pathway=PWY-7800}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=orthology-esiliculosus}}
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
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Revision as of 17:09, 21 March 2018

Reaction RXN-11056

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6398, melatonin degradation I: PWY-6398
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links