Difference between revisions of "NADPHOS-DEPHOS-PWY-1"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11046 RXN-11046] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11046 RXN-11046] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
* ec number:
−
* common name:
+
** [http://enzyme.expasy.org/EC/2.1.1.163 EC-2.1.1.163]
−
** sucrose degradation II (sucrose synthase)
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''4''' reactions found over '''5''' reactions in the full pathway
+
* With identifiers:
−
* [[FRUCTOKINASE-RXN]]
+
** 1 [[Demethylmenaquinols]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[Menaquinols]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
−
** 3 associated gene(s):
+
* With common name(s):
−
*** [[Tiso_gene_17974]]
+
** 1 a demethylmenaquinol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 a menaquinol[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
−
*** [[Tiso_gene_3107]]
+
 
−
*** [[Tiso_gene_1303]]
+
== Genes associated with this reaction  ==
−
** 4 reconstruction source(s) associated:
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[annotation-experimental_annotation]]
+
* Gene: [[Tiso_gene_5920]]
−
*** [[orthology-athaliana]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[orthology-creinhardtii]]
+
* Gene: [[Tiso_gene_13355]]
−
*** [[annotation-in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
* [[GLUC1PURIDYLTRANS-RXN]]
+
* Gene: [[Tiso_gene_9109]]
−
** 14 associated gene(s):
+
** Source: [[orthology-esiliculosus]]
−
*** [[Tiso_gene_6459]]
+
* Gene: [[Tiso_gene_19352]]
−
*** [[Tiso_gene_5879]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[Tiso_gene_17566]]
+
== Pathways  ==
−
*** [[Tiso_gene_16930]]
+
== Reconstruction information  ==
−
*** [[Tiso_gene_14796]]
+
* Category: [[orthology]]
−
*** [[Tiso_gene_9110]]
+
** Source: [[orthology-esiliculosus]]
−
*** [[Tiso_gene_17531]]
+
*** Tool: [[pantograph]]
−
*** [[Tiso_gene_4816]]
+
−
*** [[Tiso_gene_7102]]
+
−
*** [[Tiso_gene_13477]]
+
−
*** [[Tiso_gene_7440]]
+
−
*** [[Tiso_gene_11401]]
+
−
*** [[Tiso_gene_6457]]
+
−
*** [[Tiso_gene_6458]]
+
−
** 4 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[orthology-athaliana]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[PGLUCISOM-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Tiso_gene_19480]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-experimental_annotation]]
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[orthology-esiliculosus]]
+
−
* [[PHOSPHOGLUCMUT-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Tiso_gene_13477]]
+
−
*** [[Tiso_gene_4816]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[annotation-in-silico_annotation]]
+
−
*** [[manual-primary_network]]
+
−
*** [[annotation-experimental_annotation]]
+
−
== Reaction(s) not found ==
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-SYNTHASE-RXN SUCROSE-SYNTHASE-RXN]
+
 
== External links  ==
 
== External links  ==
−
* ARACYC:
+
* RHEA:
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3801 PWY-3801]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26466 26466]
−
{{#set: taxonomic range=TAX-1117}}
+
* LIGAND-RXN:
−
{{#set: taxonomic range=TAX-33090}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R09736 R09736]
−
{{#set: common name=sucrose degradation II (sucrose synthase)}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04993 R04993]
−
{{#set: reaction found=4}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: total reaction=5}}
+
{{#set: ec number=EC-2.1.1.163}}
−
{{#set: completion rate=80.0}}
+
{{#set: gene associated=Tiso_gene_5920|Tiso_gene_13355|Tiso_gene_9109|Tiso_gene_19352}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 15:52, 21 March 2018

Reaction RXN-11046

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=NADPHOS-DEPHOS-PWY-1&oldid=30826"