Difference between revisions of "NONMEVIPP-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN] == * direction: ** LEF...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN 2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** 4-methyl-2-oxopentanoate dehydrogenase (acylating)
+
** methylerythritol phosphate pathway I
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** nonmevalonate isopentenyl diphosphate biosynthesis
 +
** methylerythritol phosphate degradation
 +
** MEP degradation
 +
** deoxyxylulose phosphate pathway
 +
** DOXP pathway
 +
** Rohmer pathway
 +
** isopentenyl diphosphate biosynthesis -- mevalonate-independent
 +
** nonmevalonate isoprenoid pathway
 +
** MEP pathway
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''9''' reactions found over '''9''' reactions in the full pathway
−
** 1 [[NAD]][c] '''+''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[ISOVALERYL-COA]][c]
+
* [[2.7.1.148-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 NAD+[c] '''+''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 CO2[c] '''+''' 1 NADH[c] '''+''' 1 isovaleryl-CoA[c]
+
*** [[Tiso_gene_13463]]
−
 
+
** 7 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-experimental_annotation]]
−
== Pathways  ==
+
*** [[orthology-esiliculosus]]
−
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
+
*** [[annotation-in-silico_annotation]]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
*** [[orthology-athaliana]]
−
== Reconstruction information  ==
+
*** [[orthology-synechocystis]]
−
* [[annotation]]:
+
*** [[manual-primary_network]]
−
** [[pathwaytools]]:
+
*** [[orthology-creinhardtii]]
−
*** [[experimental_annotation]]
+
* [[2.7.7.60-RXN]]
−
*** [[in-silico_annotation]]
+
** 1 associated gene(s):
 +
*** [[Tiso_gene_17568]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[DXPREDISOM-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_15169]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[DXS-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_17311]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[IPPISOM-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_8653]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[ISPH2-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_5609]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[RXN-15878]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
* [[RXN0-302]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_9642]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[RXN0-884]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_5609]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ECOCYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25177 25177]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
−
* LIGAND-RXN:
+
* ARACYC:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01651 R01651]
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=4-methyl-2-oxopentanoate dehydrogenase (acylating)}}
+
{{#set: common name=methylerythritol phosphate pathway I}}
−
{{#set: ec number=EC-1.2.1}}
+
{{#set: common name=nonmevalonate isopentenyl diphosphate biosynthesis|methylerythritol phosphate degradation|MEP degradation|deoxyxylulose phosphate pathway|DOXP pathway|Rohmer pathway|isopentenyl diphosphate biosynthesis -- mevalonate-independent|nonmevalonate isoprenoid pathway|MEP pathway}}
−
{{#set: in pathway=LEU-DEG2-PWY}}
+
{{#set: reaction found=9}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: total reaction=9}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: completion rate=100.0}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:33, 21 March 2018

Pathway NONMEVIPP-PWY

  • taxonomic range:
  • common name:
    • methylerythritol phosphate pathway I
  • Synonym(s):
    • nonmevalonate isopentenyl diphosphate biosynthesis
    • methylerythritol phosphate degradation
    • MEP degradation
    • deoxyxylulose phosphate pathway
    • DOXP pathway
    • Rohmer pathway
    • isopentenyl diphosphate biosynthesis -- mevalonate-independent
    • nonmevalonate isoprenoid pathway
    • MEP pathway

Reaction(s) found

9 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=NONMEVIPP-PWY&oldid=42311"