Difference between revisions of "OANTIGEN-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5286 RXN-5286] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5286 RXN-5286] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200918 TAX-200918]
−
* ec number:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200940 TAX-200940]
−
** [http://enzyme.expasy.org/EC/1.3.1.75 EC-1.3.1.75]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-544448 TAX-544448]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-508458 TAX-508458]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-203691 TAX-203691]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-203682 TAX-203682]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40117 TAX-40117]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-142182 TAX-142182]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-32066 TAX-32066]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1783270 TAX-1783270]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-74152 TAX-74152]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68297 TAX-68297]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1297 TAX-1297]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200930 TAX-200930]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200938 TAX-200938]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-200795]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1783257 TAX-1783257]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-67814 TAX-67814]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68336 TAX-68336]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 +
* common name:
 +
** O-antigen building blocks biosynthesis (E. coli)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
  '''3''' reactions found over '''5''' reactions in the full pathway
−
** 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADP]][c]
+
* [[DTDPRHAMSYN-PWY]]
−
* With common name(s):
+
** 0 associated gene:
−
** 1 3,8-divinyl chlorophyllide a[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 chlorophyllide a[c] '''+''' 1 NADP+[c]
+
* [[GALPMUT-RXN]]
−
 
+
** 2 associated gene(s):
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_15395]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_3775]]
−
* Gene: [[Tiso_gene_13868]]
+
** 2 reconstruction source(s) associated:
−
** Source: [[orthology-creinhardtii]]
+
*** [[annotation-in-silico_annotation]]
−
== Pathways ==
+
*** [[annotation-experimental_annotation]]
−
* [[PWY-5526]], bacteriochlorophyll a biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5526 PWY-5526]
+
* [[UDPNAGSYN-PWY]]
−
** '''1''' reactions found over '''13''' reactions in the full pathway
+
** 0 associated gene:
−
* [[PWY-7758]], bacteriochlorophyll d biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7758 PWY-7758]
+
== Reaction(s) not found ==
−
** '''1''' reactions found over '''14''' reactions in the full pathway
+
−
* [[PWY-7759]], bacteriochlorophyll c biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7759 PWY-7759]
+
−
** '''1''' reactions found over '''18''' reactions in the full pathway
+
−
* [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-5086]], chlorophyll a biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5086 PWY-5086]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-7760]], bacteriochlorophyll e biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7760 PWY-7760]
+
−
** '''1''' reactions found over '''26''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-creinhardtii]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[manual]]
+
−
** Source: [[manual-primary_network]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ECOCYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14449 14449]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=OANTIGEN-PWY OANTIGEN-PWY]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-200918}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R06272 R06272]
+
{{#set: taxonomic range=TAX-200940}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-544448}}
−
{{#set: ec number=EC-1.3.1.75}}
+
{{#set: taxonomic range=TAX-508458}}
−
{{#set: gene associated=Tiso_gene_13868}}
+
{{#set: taxonomic range=TAX-203691}}
−
{{#set: in pathway=PWY-5526|PWY-7758|PWY-7759|PWY-5064|PWY-5086|PWY-7760}}
+
{{#set: taxonomic range=TAX-203682}}
−
{{#set: reconstruction category=orthology|manual}}
+
{{#set: taxonomic range=TAX-40117}}
−
{{#set: reconstruction source=manual-primary_network|orthology-creinhardtii}}
+
{{#set: taxonomic range=TAX-142182}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: taxonomic range=TAX-32066}}
 +
{{#set: taxonomic range=TAX-1783270}}
 +
{{#set: taxonomic range=TAX-74152}}
 +
{{#set: taxonomic range=TAX-68297}}
 +
{{#set: taxonomic range=TAX-1297}}
 +
{{#set: taxonomic range=TAX-200930}}
 +
{{#set: taxonomic range=TAX-1117}}
 +
{{#set: taxonomic range=TAX-200938}}
 +
{{#set: taxonomic range=TAX-200795}}
 +
{{#set: taxonomic range=TAX-1783257}}
 +
{{#set: taxonomic range=TAX-67814}}
 +
{{#set: taxonomic range=TAX-68336}}
 +
{{#set: taxonomic range=TAX-200783}}
 +
{{#set: taxonomic range=TAX-1224}}
 +
{{#set: common name=O-antigen building blocks biosynthesis (E. coli)}}
 +
{{#set: reaction found=3}}
 +
{{#set: total reaction=5}}
 +
{{#set: completion rate=60.0}}

Latest revision as of 20:38, 21 March 2018

Pathway OANTIGEN-PWY

Reaction(s) found

3 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links














Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=OANTIGEN-PWY&oldid=42953"