Difference between revisions of "OXIDATIVEPENT-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALDEHYDROG-RXN 3-ISOPROPYLMALDEHYDROG-RXN] == * direction: ** REVERSIBLE * common name:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACOA120or ACOA120or] == * direction: ** LEFT-TO-RIGHT * common name: ** Lauroyl-CoA:(acceptor) 2,3-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALDEHYDROG-RXN 3-ISOPROPYLMALDEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACOA120or ACOA120or] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-isopropylmalate dehydrogenase
+
** Lauroyl-CoA:(acceptor) 2,3-oxidoreductase
 
* Synonym(s):
 
* Synonym(s):
−
** β-isopropylmalic enzyme
 
−
** threo-Ds-3-isopropylmalate dehydrogenase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7100]][c] '''+''' 1 [[NADH]][c]
+
** 1.0 [[LAUROYLCOA-CPD]][x] '''+''' 1.0 [[FAD]][x] '''=>''' 1.0 [[FADH2]][x] '''+''' 1.0 [[CPD-7222]][x]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 (2R,3S)-3-isopropylmalate[c] '''<=>''' 1 H+[c] '''+''' 1 (2S)-2-isopropyl-3-oxosuccinate[c] '''+''' 1 NADH[c]
+
** 1.0 lauroyl-CoA[x] '''+''' 1.0 FAD[x] '''=>''' 1.0 FADH2[x] '''+''' 1.0 trans-dodec-2-enoyl-CoA[x]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2920]]
+
* [[Tiso_gene_16674]]
−
** EXPERIMENTAL_ANNOTATION
+
** [[pantograph]]-[[creinhardtii]]
−
***EC-NUMBER
+
* [[Tiso_gene_18566]]
−
** [[pantograph]]-[[athaliana]]
+
** [[pantograph]]-[[creinhardtii]]
−
** [[pantograph]]-[[synechocystis]]
+
* [[Tiso_gene_8272]]
−
** [[pantograph]]-[[esiliculosus]]
+
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_17967]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[synechocystis]]
+
*** [[creinhardtii]]
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10892 10892]
+
{{#set: common name=Lauroyl-CoA:(acceptor) 2,3-oxidoreductase}}
−
* LIGAND-RXN:
+
{{#set: gene associated=Tiso_gene_16674|Tiso_gene_18566|Tiso_gene_8272|Tiso_gene_17967}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04426 R04426]
+
{{#set: in pathway=}}
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P05644 P05644]
+
−
** [http://www.uniprot.org/uniprot/P05645 P05645]
+
−
** [http://www.uniprot.org/uniprot/Q01987 Q01987]
+
−
** [http://www.uniprot.org/uniprot/Q00412 Q00412]
+
−
** [http://www.uniprot.org/uniprot/P08791 P08791]
+
−
** [http://www.uniprot.org/uniprot/P30125 P30125]
+
−
** [http://www.uniprot.org/uniprot/Q9PLW0 Q9PLW0]
+
−
** [http://www.uniprot.org/uniprot/O66607 O66607]
+
−
** [http://www.uniprot.org/uniprot/P12010 P12010]
+
−
** [http://www.uniprot.org/uniprot/P04173 P04173]
+
−
** [http://www.uniprot.org/uniprot/Q5SIY4 Q5SIY4]
+
−
** [http://www.uniprot.org/uniprot/P24098 P24098]
+
−
** [http://www.uniprot.org/uniprot/Q9JU79 Q9JU79]
+
−
** [http://www.uniprot.org/uniprot/P43860 P43860]
+
−
** [http://www.uniprot.org/uniprot/P41019 P41019]
+
−
** [http://www.uniprot.org/uniprot/P54354 P54354]
+
−
** [http://www.uniprot.org/uniprot/Q56268 Q56268]
+
−
** [http://www.uniprot.org/uniprot/P29102 P29102]
+
−
** [http://www.uniprot.org/uniprot/P37412 P37412]
+
−
** [http://www.uniprot.org/uniprot/P23390 P23390]
+
−
** [http://www.uniprot.org/uniprot/P29696 P29696]
+
−
** [http://www.uniprot.org/uniprot/P41766 P41766]
+
−
** [http://www.uniprot.org/uniprot/Q02143 Q02143]
+
−
** [http://www.uniprot.org/uniprot/P34733 P34733]
+
−
** [http://www.uniprot.org/uniprot/P50180 P50180]
+
−
** [http://www.uniprot.org/uniprot/Q12591 Q12591]
+
−
** [http://www.uniprot.org/uniprot/Q12590 Q12590]
+
−
** [http://www.uniprot.org/uniprot/Q12592 Q12592]
+
−
** [http://www.uniprot.org/uniprot/P07139 P07139]
+
−
** [http://www.uniprot.org/uniprot/P41926 P41926]
+
−
** [http://www.uniprot.org/uniprot/P48012 P48012]
+
−
** [http://www.uniprot.org/uniprot/P87256 P87256]
+
−
** [http://www.uniprot.org/uniprot/P87257 P87257]
+
−
** [http://www.uniprot.org/uniprot/P73960 P73960]
+
−
** [http://www.uniprot.org/uniprot/O86504 O86504]
+
−
** [http://www.uniprot.org/uniprot/O85837 O85837]
+
−
** [http://www.uniprot.org/uniprot/P18869 P18869]
+
−
** [http://www.uniprot.org/uniprot/P34738 P34738]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=3-isopropylmalate dehydrogenase}}
+
−
{{#set: common name=&beta;-isopropylmalic enzyme|threo-Ds-3-isopropylmalate dehydrogenase}}
+
−
{{#set: gene associated=Tiso_gene_2920}}
+
−
{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
+
{{#set: reconstruction source=creinhardtii}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation}}
+

Revision as of 17:30, 10 January 2018

Reaction ACOA120or

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Lauroyl-CoA:(acceptor) 2,3-oxidoreductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 lauroyl-CoA[x] + 1.0 FAD[x] => 1.0 FADH2[x] + 1.0 trans-dodec-2-enoyl-CoA[x]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=OXIDATIVEPENT-PWY&oldid=13285"