Difference between revisions of "P181-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16540 RXN-16540] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase **...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16540 RXN-16540] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
−
** acyl-coenzyme_a_oxidase
+
** nicotine degradation I (pyridine pathway)
−
** ORF
+
−
** acyl-_dehydrogenase
+
−
** acyl-CoA_dehydrogenase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.3.8.9 EC-1.3.8.9]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''17''' reactions in the full pathway
−
** 1 [[PALMITYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[CPD0-2117]][c] '''+''' 1 [[ETF-Reduced]][c]
+
* [[GABATRANSAM-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 palmitoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 trans-hexadec-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
+
*** [[Tiso_gene_11231]]
−
 
+
** 1 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[orthology-synechocystis]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[SUCCSEMIALDDEHYDROG-RXN]]
−
* [[Tiso_gene_5991]]
+
** 1 associated gene(s):
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_6952]]
−
***EC-NUMBER
+
** 1 reconstruction source(s) associated:
−
* [[Tiso_gene_18566]]
+
*** [[orthology-synechocystis]]
−
** IN-SILICO_ANNOTATION
+
== Reaction(s) not found ==
−
***EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.10-RXN 1.14.13.10-RXN]
−
* [[Tiso_gene_16631]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=NICOTINE-DEHYDROGENASE-RXN NICOTINE-DEHYDROGENASE-RXN]
−
** IN-SILICO_ANNOTATION
+
* [http://metacyc.org/META/NEW-IMAGE?object=R161-RXN R161-RXN]
−
***EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=R162-RXN R162-RXN]
−
* [[Tiso_gene_883]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=R181-RXN R181-RXN]
−
** EXPERIMENTAL_ANNOTATION
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13065 RXN-13065]
−
***EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13067 RXN-13067]
−
* [[Tiso_gene_6475]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13068 RXN-13068]
−
** IN-SILICO_ANNOTATION
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13069 RXN-13069]
−
***EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13070 RXN-13070]
−
* [[Tiso_gene_17967]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13071 RXN-13071]
−
** IN-SILICO_ANNOTATION
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13072 RXN-13072]
−
***EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16526 RXN-16526]
−
== Pathways  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16527 RXN-16527]
−
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16528 RXN-16528]
−
** '''6''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
+
−
** '''6''' reactions found over '''22''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UM-BBD-PWY : nic
−
{{#set: common name=acyl-coenzyme_a_oxidase}}
+
{{#set: taxonomic range=TAX-201174}}
−
{{#set: common name=ORF}}
+
{{#set: common name=nicotine degradation I (pyridine pathway)}}
−
{{#set: common name=acyl-_dehydrogenase}}
+
{{#set: reaction found=2}}
−
{{#set: common name=acyl-CoA_dehydrogenase}}
+
{{#set: total reaction=17}}
−
{{#set: ec number=EC-1.3.8.9}}
+
{{#set: completion rate=12.0}}
−
{{#set: gene associated=Tiso_gene_5991|Tiso_gene_18566|Tiso_gene_16631|Tiso_gene_883|Tiso_gene_6475|Tiso_gene_17967}}
+
−
{{#set: in pathway=PWY-7654|PWY-7656}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:07, 21 March 2018

Pathway P181-PWY

  • taxonomic range:
  • common name:
    • nicotine degradation I (pyridine pathway)
  • Synonym(s):

Reaction(s) found

2 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links

  • UM-BBD-PWY : nic



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=P181-PWY&oldid=39647"