Difference between revisions of "P221-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9538 RXN-9538] == * direction: ** LEFT-TO-RIGHT * common name: ** trans tetradec-2-enoyl-[acyl-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P221-PWY P221-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9538 RXN-9538] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P221-PWY P221-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific)
+
** octane oxidation
−
** polyketide_synthase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.3.1.10 EC-1.3.1.10]
+
−
** [http://enzyme.expasy.org/EC/1.3.1.39 EC-1.3.1.39]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
 
* Synonym(s):
 
* Synonym(s):
−
** trans tetradec-2-enoyl-[ACP] reductase
 
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''5''' reactions in the full pathway
−
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Tetradec-2-enoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Myristoyl-ACPs]][c]
+
* [[R222-RXN]]
−
* With common name(s):
+
** 0 associated gene:
−
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a trans tetradec-2-enoyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a myristoyl-[acp][c]
+
** 1 reconstruction source(s) associated:
−
 
+
*** [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
* [[R223-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 9 associated gene(s):
−
* [[Tiso_gene_10876]]
+
*** [[Tiso_gene_348]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_136]]
−
***EC-NUMBER
+
*** [[Tiso_gene_10876]]
−
* [[Tiso_gene_500]]
+
*** [[Tiso_gene_13394]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_500]]
−
***EC-NUMBER
+
*** [[Tiso_gene_7855]]
−
* [[Tiso_gene_13394]]
+
*** [[Tiso_gene_4191]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_135]]
−
***EC-NUMBER
+
*** [[Tiso_gene_9394]]
−
* [[Tiso_gene_10778]]
+
** 3 reconstruction source(s) associated:
−
** [[pantograph]]-[[synechocystis]]
+
*** [[annotation-experimental_annotation]]
−
* [[Tiso_gene_135]]
+
*** [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-esiliculosus]]
−
***EC-NUMBER
+
== Reaction(s) not found ==
−
* [[Tiso_gene_136]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ALKANE-1-MONOOXYGENASE-RXN ALKANE-1-MONOOXYGENASE-RXN]
−
** IN-SILICO_ANNOTATION
+
* [http://metacyc.org/META/NEW-IMAGE?object=R221-RXN R221-RXN]
−
***EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=RUBREDOXIN--NAD+-REDUCTASE-RXN RUBREDOXIN--NAD+-REDUCTASE-RXN]
−
== Pathways  ==
+
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[synechocystis]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* UM-BBD-PWY : oct
−
{{#set: common name=trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific)}}
+
{{#set: taxonomic range=TAX-4751}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: ec number=EC-1.3.1.10}}
+
{{#set: common name=octane oxidation}}
−
{{#set: ec number=EC-1.3.1.39}}
+
{{#set: reaction found=2}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: total reaction=5}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: completion rate=40.0}}
−
{{#set: common name=trans tetradec-2-enoyl-[ACP] reductase}}
+
−
{{#set: gene associated=Tiso_gene_10876|Tiso_gene_500|Tiso_gene_13394|Tiso_gene_10778|Tiso_gene_135|Tiso_gene_136}}
+
−
{{#set: in pathway=PWY-5994}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:23, 21 March 2018

Pathway P221-PWY

  • taxonomic range:
  • common name:
    • octane oxidation
  • Synonym(s):

Reaction(s) found

2 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links

  • UM-BBD-PWY : oct




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=P221-PWY&oldid=41337"