Difference between revisions of "P281-PWY"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACP-S-ACETYLTRANSFER-RXN ACP-S-ACETYLTRANSFER-RXN] == * direction: ** REVERSIBLE * common name: **...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACP-S-ACETYLTRANSFER-RXN ACP-S-ACETYLTRANSFER-RXN] == * direction: ** REVERSIBLE * common name: **...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[ACP]][c] '''+''' 1 [[ACETYL-COA]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[ACETYL-ACP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a holo-[acyl-carrier protein][c] '''+''' 1 acetyl-CoA[c] '''<=>''' 1 coenzyme A[c] '''+''' 1 an acetyl-[acp][c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
| − | |||
* [[Tiso_gene_15991]] | * [[Tiso_gene_15991]] | ||
** [[pantograph]]-[[athaliana]] | ** [[pantograph]]-[[athaliana]] | ||
** [[pantograph]]-[[athaliana]] | ** [[pantograph]]-[[athaliana]] | ||
** [[pantograph]]-[[synechocystis]] | ** [[pantograph]]-[[synechocystis]] | ||
| + | * [[Tiso_gene_135]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
* [[Tiso_gene_136]] | * [[Tiso_gene_136]] | ||
** IN-SILICO_ANNOTATION | ** IN-SILICO_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
| − | * [[ | + | * [[Tiso_gene_13394]] |
** IN-SILICO_ANNOTATION | ** IN-SILICO_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
| − | * [[ | + | * [[Tiso_gene_500]] |
** IN-SILICO_ANNOTATION | ** IN-SILICO_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
| − | * [[ | + | * [[Tiso_gene_10876]] |
** IN-SILICO_ANNOTATION | ** IN-SILICO_ANNOTATION | ||
***EC-NUMBER | ***EC-NUMBER | ||
| Line 44: | Line 44: | ||
** '''5''' reactions found over '''8''' reactions in the full pathway | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]] | + | ** Source: [[orthology-athaliana]] |
| − | ** | + | *** Tool: [[pantograph]] |
| − | *** [[ | + | ** Source: [[orthology-synechocystis]] |
| − | * [[manual]] | + | *** Tool: [[pantograph]] |
| − | ** [[primary_network]] | + | * Category: [[manual]] |
| − | * [[annotation]] | + | ** Source: [[manual-primary_network]] |
| − | ** [[ | + | * Category: [[annotation]] |
| − | *** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| Line 67: | Line 68: | ||
{{#set: ec number=EC-2.3.1.85}} | {{#set: ec number=EC-2.3.1.85}} | ||
{{#set: ec number=EC-2.3.1.38}} | {{#set: ec number=EC-2.3.1.38}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=Tiso_gene_15991|Tiso_gene_135|Tiso_gene_136|Tiso_gene_13394|Tiso_gene_500|Tiso_gene_10876}} |
{{#set: in pathway=PWY-5966|FASYN-INITIAL-PWY}} | {{#set: in pathway=PWY-5966|FASYN-INITIAL-PWY}} | ||
| − | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=orthology|manual|annotation}} |
| − | + | {{#set: reconstruction source=manual-primary_network|orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis}} | |
| − | + | {{#set: reconstruction tool=pantograph|pathwaytools}} | |
| − | + | ||
| − | {{#set: reconstruction source=primary_network | + | |
| − | + | ||
| − | {{#set: reconstruction tool=pathwaytools | + | |
| − | + | ||
Revision as of 19:24, 18 March 2018
Contents
Reaction ACP-S-ACETYLTRANSFER-RXN
- direction:
- REVERSIBLE
- common name:
- polyketide_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ACP[c] + 1 ACETYL-COA[c] <=> 1 CO-A[c] + 1 ACETYL-ACP[c]
- With common name(s):
- 1 a holo-[acyl-carrier protein][c] + 1 acetyl-CoA[c] <=> 1 coenzyme A[c] + 1 an acetyl-[acp][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_15991
- Tiso_gene_135
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_136
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_13394
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_500
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_10876
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
Pathways
- PWY-5966, fatty acid biosynthesis initiation II: PWY-5966
- 2 reactions found over 2 reactions in the full pathway
- FASYN-INITIAL-PWY, superpathway of fatty acid biosynthesis initiation (E. coli): FASYN-INITIAL-PWY
- 5 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-athaliana
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
