Difference between revisions of "P341-PWY"

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(Created page with "Category:Gene == Gene Tiso_gene_8455 == * left end position: ** 7677 * transcription direction: ** POSITIVE * right end position: ** 9688 * centisome position: ** 75.04399...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_8455 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY] ==
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* left end position:
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* taxonomic range:
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** 7677
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* transcription direction:
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* common name:
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** POSITIVE
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** glycolysis V (Pyrococcus)
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* right end position:
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** 9688
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* centisome position:
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** 75.04399   
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* Synonym(s):
 
* Synonym(s):
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** archaeal Embden-Meyerhof pathway
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** archaeal Embden-Meyerhof-Parnas pathway
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** archaeal EMP pathway
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[4.4.1.14-RXN]]
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'''6''' reactions found over '''9''' reactions in the full pathway
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** in-silico_annotation
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* [[2PGADEHYDRAT-RXN]]
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***automated-name-match
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** 4 associated gene(s):
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_8720]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_14718]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_5619]]
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== Pathways associated ==
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*** [[Tiso_gene_13317]]
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* [[ETHYL-PWY]]
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** 7 reconstruction source(s) associated:
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* [[PWY-7270]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[3PGAREARR-RXN]]
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** 16 associated gene(s):
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*** [[Tiso_gene_15048]]
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*** [[Tiso_gene_7201]]
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*** [[Tiso_gene_9922]]
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*** [[Tiso_gene_2841]]
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*** [[Tiso_gene_14530]]
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*** [[Tiso_gene_16754]]
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*** [[Tiso_gene_2365]]
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*** [[Tiso_gene_16271]]
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*** [[Tiso_gene_5468]]
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*** [[Tiso_gene_20311]]
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*** [[Tiso_gene_14664]]
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*** [[Tiso_gene_15391]]
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*** [[Tiso_gene_14212]]
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*** [[Tiso_gene_10516]]
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*** [[Tiso_gene_9923]]
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*** [[Tiso_gene_2667]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[F16ALDOLASE-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_12272]]
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*** [[Tiso_gene_65]]
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*** [[Tiso_gene_9119]]
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*** [[Tiso_gene_14568]]
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*** [[Tiso_gene_9179]]
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*** [[Tiso_gene_9118]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-experimental_annotation]]
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* [[PEPDEPHOS-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_18206]]
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*** [[Tiso_gene_14504]]
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*** [[Tiso_gene_974]]
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*** [[Tiso_gene_14505]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[PGLUCISOM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_19480]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[TRIOSEPISOMERIZATION-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_19961]]
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*** [[Tiso_gene_20000]]
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*** [[Tiso_gene_19962]]
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*** [[Tiso_gene_10646]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.7.6-RXN 1.2.7.6-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R302-RXN R302-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17001 RXN-17001]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=7677}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=glycolysis V (Pyrococcus)}}
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{{#set: right end position=9688}}
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{{#set: common name=archaeal Embden-Meyerhof pathway|archaeal Embden-Meyerhof-Parnas pathway|archaeal EMP pathway}}
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{{#set: centisome position=75.04399    }}
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{{#set: reaction found=6}}
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{{#set: reaction associated=4.4.1.14-RXN}}
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{{#set: total reaction=9}}
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{{#set: pathway associated=ETHYL-PWY|PWY-7270}}
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{{#set: completion rate=67.0}}

Latest revision as of 20:15, 21 March 2018

Pathway P341-PWY

  • taxonomic range:
  • common name:
    • glycolysis V (Pyrococcus)
  • Synonym(s):
    • archaeal Embden-Meyerhof pathway
    • archaeal Embden-Meyerhof-Parnas pathway
    • archaeal EMP pathway

Reaction(s) found

6 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=P341-PWY&oldid=40427"