Difference between revisions of "P562-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-150 RXN1F-150] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P562-PWY P562-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-150 RXN1F-150] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P562-PWY P562-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
** [http://enzyme.expasy.org/EC/5.5.1.19 EC-5.5.1.19]
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* common name:
 +
** myo-inositol degradation I
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''7''' reactions in the full pathway
** 1 [[CPD1F-114]][c] '''=>''' 1 [[CPD1F-126]][c]
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* [[MYO-INOSITOL-2-DEHYDROGENASE-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 all-trans-lycopene[c] '''=>''' 1 γ-carotene[c]
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*** [[Tiso_gene_17306]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-2902]]
* [[Tiso_gene_11980]]
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** 1 associated gene(s):
** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_11323]]
** [[pantograph]]-[[esiliculosus]]
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** 1 reconstruction source(s) associated:
** [[pantograph]]-[[creinhardtii]]
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*** [[annotation-in-silico_annotation]]
* [[Tiso_gene_6282]]
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== Reaction(s) not found ==
** [[pantograph]]-[[athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=4.1.2.29-RXN 4.1.2.29-RXN]
* [[Tiso_gene_4457]]
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* [http://metacyc.org/META/NEW-IMAGE?object=5-DEHYDRO-2-DEOXYGLUCONOKINASE-RXN 5-DEHYDRO-2-DEOXYGLUCONOKINASE-RXN]
** [[pantograph]]-[[athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=MYO-INOSOSE-2-DEHYDRATASE-RXN MYO-INOSOSE-2-DEHYDRATASE-RXN]
* [[Tiso_gene_3577]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14149 RXN-14149]
** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14150 RXN-14150]
* [[Tiso_gene_1547]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_8263]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-5943]], β-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5943 PWY-5943]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7591]], okenone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7591 PWY-7591]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-4751}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32222 32222]
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{{#set: taxonomic range=TAX-2}}
* LIGAND-RXN:
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{{#set: common name=myo-inositol degradation I}}
** [http://www.genome.jp/dbget-bin/www_bget?R05341 R05341]
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{{#set: reaction found=2}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=7}}
{{#set: ec number=EC-5.5.1.19}}
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{{#set: completion rate=29.0}}
{{#set: gene associated=Tiso_gene_11980|Tiso_gene_6282|Tiso_gene_4457|Tiso_gene_3577|Tiso_gene_1547|Tiso_gene_8263}}
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{{#set: in pathway=PWY-5943|PWY-7591}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:33, 21 March 2018

Pathway P562-PWY

  • taxonomic range:
  • common name:
    • myo-inositol degradation I
  • Synonym(s):

Reaction(s) found

2 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links