Difference between revisions of "PRAISOM-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13912 CPD-13912] == * smiles: ** C(C(C(O)C(C([O-])=O)(C([O-])=O)O)O)O * inchi key: ** InChI...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13912 CPD-13912] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] ==
−
* smiles:
+
* direction:
−
** C(C(C(O)C(C([O-])=O)(C([O-])=O)O)O)O
+
** LEFT-TO-RIGHT
−
* inchi key:
+
* ec number:
−
** InChIKey=CQIRJDZGDXTXKF-UHFFFAOYSA-L
+
** [http://enzyme.expasy.org/EC/5.3.1.24 EC-5.3.1.24]
−
* common name:
+
−
** 2-carboxy-L-threo-pentonate
+
−
* molecular weight:
+
−
** 208.124   
+
 
* Synonym(s):
 
* Synonym(s):
−
** 2-carboxy-L-xylonate
 
−
** 2-hydroxy-2-(1,2,3-trihydroxypropyl)propanedioate
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[RXN-12871]]
+
** 1 [[N-5-PHOSPHORIBOSYL-ANTHRANILATE]][c] '''=>''' 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 N-(5-phosphoribosyl)-anthranilate[c] '''=>''' 1 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_10297]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_10298]]
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
== Pathways  ==
 +
* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657336 90657336]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21540 21540]
−
{{#set: smiles=C(C(C(O)C(C([O-])=O)(C([O-])=O)O)O)O}}
+
* LIGAND-RXN:
−
{{#set: inchi key=InChIKey=CQIRJDZGDXTXKF-UHFFFAOYSA-L}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03509 R03509]
−
{{#set: common name=2-carboxy-L-threo-pentonate}}
+
* UNIPROT:
−
{{#set: molecular weight=208.124    }}
+
** [http://www.uniprot.org/uniprot/P16923 P16923]
−
{{#set: common name=2-carboxy-L-xylonate|2-hydroxy-2-(1,2,3-trihydroxypropyl)propanedioate}}
+
** [http://www.uniprot.org/uniprot/O67853 O67853]
−
{{#set: produced by=RXN-12871}}
+
** [http://www.uniprot.org/uniprot/P12289 P12289]
 +
** [http://www.uniprot.org/uniprot/P42393 P42393]
 +
** [http://www.uniprot.org/uniprot/Q9PIF3 Q9PIF3]
 +
** [http://www.uniprot.org/uniprot/Q57893 Q57893]
 +
** [http://www.uniprot.org/uniprot/P20167 P20167]
 +
** [http://www.uniprot.org/uniprot/Q9JVD1 Q9JVD1]
 +
** [http://www.uniprot.org/uniprot/P00910 P00910]
 +
** [http://www.uniprot.org/uniprot/P00909 P00909]
 +
** [http://www.uniprot.org/uniprot/P00912 P00912]
 +
** [http://www.uniprot.org/uniprot/P13997 P13997]
 +
** [http://www.uniprot.org/uniprot/P50857 P50857]
 +
** [http://www.uniprot.org/uniprot/P27710 P27710]
 +
** [http://www.uniprot.org/uniprot/P17218 P17218]
 +
** [http://www.uniprot.org/uniprot/P00908 P00908]
 +
** [http://www.uniprot.org/uniprot/P18483 P18483]
 +
** [http://www.uniprot.org/uniprot/Q02002 Q02002]
 +
** [http://www.uniprot.org/uniprot/Q56320 Q56320]
 +
** [http://www.uniprot.org/uniprot/Q01128 Q01128]
 +
** [http://www.uniprot.org/uniprot/P74435 P74435]
 +
** [http://www.uniprot.org/uniprot/Q9YGB1 Q9YGB1]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-5.3.1.24}}
 +
{{#set: gene associated=Tiso_gene_10297|Tiso_gene_10298}}
 +
{{#set: in pathway=TRPSYN-PWY}}
 +
{{#set: reconstruction category=orthology|manual}}
 +
{{#set: reconstruction source=manual-primary_network|orthology-creinhardtii|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:45, 21 March 2018

Reaction PRAISOM-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PRAISOM-RXN&oldid=43602"