Difference between revisions of "PROSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRCARBOXY-RXN AIRCARBOXY-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosylami...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TA...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRCARBOXY-RXN AIRCARBOXY-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** phosphoribosylaminoimidazole_carboxylase
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** L-proline biosynthesis I
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.1.21 EC-4.1.1.21]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
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** 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c]
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* [[GLUTKIN-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] '''+''' 1 CO2[c] '''=>''' 2 H+[c] '''+''' 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c]
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*** [[Tiso_gene_12021]]
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*** [[Tiso_gene_16634]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_17057]]
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Genes have been associated with this reaction based on different elements listed below.
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** 7 reconstruction source(s) associated:
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* [[Tiso_gene_16011]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[athaliana]]
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*** [[orthology-athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-synechocystis]]
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== Pathways  ==
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*** [[manual-primary_network]]
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* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
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*** [[orthology-creinhardtii]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[GLUTSEMIALDEHYDROG-RXN]]
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== Reconstruction information  ==
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** 2 associated gene(s):
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* [[orthology]]:
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*** [[Tiso_gene_16634]]
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** [[pantograph]]:
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*** [[Tiso_gene_16258]]
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*** [[esiliculosus]]
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** 6 reconstruction source(s) associated:
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*** [[athaliana]]
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*** [[orthology-esiliculosus]]
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* [[manual]]:
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*** [[annotation-in-silico_annotation]]
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** [[primary_network]]
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*** [[orthology-athaliana]]
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* [[annotation]]:
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*** [[orthology-synechocystis]]
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** [[pathwaytools]]:
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*** [[manual-primary_network]]
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*** [[in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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* [[PYRROLINECARBREDUCT-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_8625]]
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*** [[Tiso_gene_20218]]
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*** [[Tiso_gene_19254]]
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*** [[Tiso_gene_17059]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[SPONTPRO-RXN]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10792 10792]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04209 R04209]
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{{#set: taxonomic range=TAX-33154}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/Q9RYC6 Q9RYC6]
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{{#set: common name=L-proline biosynthesis I}}
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** [http://www.uniprot.org/uniprot/Q9PPK5 Q9PPK5]
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{{#set: reaction found=4}}
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** [http://www.uniprot.org/uniprot/O66608 O66608]
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{{#set: total reaction=4}}
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** [http://www.uniprot.org/uniprot/O67239 O67239]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P12045 P12045]
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** [http://www.uniprot.org/uniprot/P09029 P09029]
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** [http://www.uniprot.org/uniprot/P12044 P12044]
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** [http://www.uniprot.org/uniprot/P21264 P21264]
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** [http://www.uniprot.org/uniprot/P0AG18 P0AG18]
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** [http://www.uniprot.org/uniprot/P15567 P15567]
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** [http://www.uniprot.org/uniprot/Q9XAY8 Q9XAY8]
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** [http://www.uniprot.org/uniprot/P43849 P43849]
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** [http://www.uniprot.org/uniprot/Q9JTS6 Q9JTS6]
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** [http://www.uniprot.org/uniprot/P43850 P43850]
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** [http://www.uniprot.org/uniprot/Q58033 Q58033]
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** [http://www.uniprot.org/uniprot/Q9WYS8 Q9WYS8]
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** [http://www.uniprot.org/uniprot/P22234 P22234]
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** [http://www.uniprot.org/uniprot/P22348 P22348]
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** [http://www.uniprot.org/uniprot/Q01930 Q01930]
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** [http://www.uniprot.org/uniprot/P55195 P55195]
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** [http://www.uniprot.org/uniprot/P50504 P50504]
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** [http://www.uniprot.org/uniprot/Q55498 Q55498]
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** [http://www.uniprot.org/uniprot/P74724 P74724]
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** [http://www.uniprot.org/uniprot/O80937 O80937]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphoribosylaminoimidazole_carboxylase}}
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{{#set: ec number=EC-4.1.1.21}}
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{{#set: gene associated=Tiso_gene_16011}}
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{{#set: in pathway=PWY-6124}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:37, 21 March 2018

Pathway PROSYN-PWY

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PROSYN-PWY&oldid=42767"