Difference between revisions of "PWY-1422"

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(Created page with "Category:Gene == Gene Tiso_gene_10116 == * left end position: ** 3216 * transcription direction: ** NEGATIVE * right end position: ** 5027 * centisome position: ** 28.4727...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Tiso_gene_10116 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422] ==
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* left end position:
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* taxonomic range:
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** 3216
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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* transcription direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** NEGATIVE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2870 TAX-2870]
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
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** 5027
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* centisome position:
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* common name:
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** 28.472775   
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** vitamin E biosynthesis (tocopherols)
 
* Synonym(s):
 
* Synonym(s):
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** tocopherol biosynthesis
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[KETOACYLCOATHIOL-RXN]]
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'''5''' reactions found over '''7''' reactions in the full pathway
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** in-silico_annotation
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* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
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***ec-number
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** 3 associated gene(s):
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** experimental_annotation
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*** [[Tiso_gene_18977]]
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***ec-number
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*** [[Tiso_gene_18976]]
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* [[RXN-10699]]
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*** [[Tiso_gene_18328]]
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** in-silico_annotation
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** 4 reconstruction source(s) associated:
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***ec-number
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*** [[orthology-athaliana]]
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** experimental_annotation
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*** [[annotation-in-silico_annotation]]
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***ec-number
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*** [[orthology-synechocystis]]
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* [[RXN-10700]]
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*** [[orthology-esiliculosus]]
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** in-silico_annotation
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* [[RXN-2541]]
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***ec-number
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** 1 associated gene(s):
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** experimental_annotation
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*** [[Tiso_gene_13582]]
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***ec-number
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** 3 reconstruction source(s) associated:
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* [[RXN-10701]]
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*** [[orthology-athaliana]]
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** in-silico_annotation
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*** [[orthology-creinhardtii]]
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***ec-number
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*** [[orthology-synechocystis]]
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** experimental_annotation
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* [[RXN-2542]]
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***ec-number
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** 2 associated gene(s):
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* [[RXN-11246]]
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*** [[Tiso_gene_11392]]
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** in-silico_annotation
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*** [[Tiso_gene_2596]]
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***ec-number
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** 4 reconstruction source(s) associated:
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** experimental_annotation
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*** [[annotation-in-silico_annotation]]
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***ec-number
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*** [[orthology-creinhardtii]]
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* [[RXN-12565]]
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*** [[orthology-synechocystis]]
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** in-silico_annotation
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*** [[orthology-esiliculosus]]
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***ec-number
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* [[RXN-2562]]
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** experimental_annotation
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** 1 associated gene(s):
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***ec-number
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*** [[Tiso_gene_6738]]
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* [[RXN-12710]]
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** 3 reconstruction source(s) associated:
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** in-silico_annotation
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*** [[orthology-athaliana]]
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***ec-number
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*** [[orthology-creinhardtii]]
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** experimental_annotation
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*** [[orthology-synechocystis]]
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***ec-number
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* [[TOCOPHEROL-O-METHYLTRANSFERASE-RXN]]
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* [[RXN-13617]]
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** 1 associated gene(s):
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** in-silico_annotation
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*** [[Tiso_gene_6738]]
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***ec-number
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** 2 reconstruction source(s) associated:
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** experimental_annotation
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*** [[orthology-creinhardtii]]
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***ec-number
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*** [[orthology-synechocystis]]
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* [[RXN-14268]]
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== Reaction(s) not found ==
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** in-silico_annotation
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2543 RXN-2543]
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***ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2561 RXN-2561]
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** experimental_annotation
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***ec-number
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* [[RXN-14274]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14277]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14394]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14774]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14788]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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−
***ec-number
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* [[RXN-14793]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14799]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-14803]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-16137]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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−
***ec-number
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* [[RXN-17116]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-17778]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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−
***ec-number
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* [[RXN-17782]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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−
***ec-number
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* [[RXN-17787]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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−
***ec-number
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* [[RXN-17791]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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−
***ec-number
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* [[RXN-17795]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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−
***ec-number
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* [[RXN-17799]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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***ec-number
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== Pathways associated ==
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* [[PWY-6435]]
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* [[PWY-7654]]
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−
* [[PWY66-391]]
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* [[PWY-7606]]
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−
* [[PWY-7337]]
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−
* [[PWY-7340]]
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* [[PWY-7338]]
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* [[PWY-7094]]
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* [[PWY-6946]]
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* [[FAO-PWY]]
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* [[PWY-735]]
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* [[PWY-5136]]
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−
* [[PWY-7726]]
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* [[PWY-6863]]
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* [[PWY-7339]]
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* [[PWY-6948]]
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* [[PWY-7288]]
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* [[PWY-6945]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=3216}}
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* ARACYC:
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{{#set: transcription direction=NEGATIVE}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-1422 PWY-1422]
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{{#set: right end position=5027}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: centisome position=28.472775    }}
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{{#set: taxonomic range=TAX-3041}}
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{{#set: reaction associated=KETOACYLCOATHIOL-RXN|RXN-10699|RXN-10700|RXN-10701|RXN-11246|RXN-12565|RXN-12710|RXN-13617|RXN-14268|RXN-14274|RXN-14277|RXN-14394|RXN-14774|RXN-14788|RXN-14793|RXN-14799|RXN-14803|RXN-16137|RXN-17116|RXN-17778|RXN-17782|RXN-17787|RXN-17791|RXN-17795|RXN-17799}}
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{{#set: taxonomic range=TAX-2870}}
−
{{#set: pathway associated=PWY-6435|PWY-7654|PWY66-391|PWY-7606|PWY-7337|PWY-7340|PWY-7338|PWY-7094|PWY-6946|FAO-PWY|PWY-735|PWY-5136|PWY-7726|PWY-6863|PWY-7339|PWY-6948|PWY-7288|PWY-6945}}
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{{#set: taxonomic range=TAX-2763}}
 +
{{#set: taxonomic range=TAX-33090}}
 +
{{#set: common name=vitamin E biosynthesis (tocopherols)}}
 +
{{#set: common name=tocopherol biosynthesis}}
 +
{{#set: reaction found=5}}
 +
{{#set: total reaction=7}}
 +
{{#set: completion rate=71.0}}

Latest revision as of 20:19, 21 March 2018

Pathway PWY-1422

Reaction(s) found

5 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-1422&oldid=40919"