Difference between revisions of "PWY-1622"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7663 PWY-7663] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...") |
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...") |
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[[Category:Pathway]] | [[Category:Pathway]] | ||
| − | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY- | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] == |
* taxonomic range: | * taxonomic range: | ||
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] | ||
* common name: | * common name: | ||
| − | ** | + | ** formaldehyde assimilation I (serine pathway) |
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Reaction(s) found == | == Reaction(s) found == | ||
| − | + | '''5''' reactions found over '''13''' reactions in the full pathway | |
| − | ** [[RXN- | + | * [[2PGADEHYDRAT-RXN]] |
| − | ** [[RXN- | + | ** 4 associated gene(s): |
| − | ** [[RXN- | + | *** [[Tiso_gene_8720]] |
| + | *** [[Tiso_gene_14718]] | ||
| + | *** [[Tiso_gene_5619]] | ||
| + | *** [[Tiso_gene_13317]] | ||
| + | ** 7 reconstruction source(s) associated: | ||
| + | *** [[annotation-experimental_annotation]] | ||
| + | *** [[orthology-esiliculosus]] | ||
| + | *** [[annotation-in-silico_annotation]] | ||
| + | *** [[orthology-athaliana]] | ||
| + | *** [[orthology-synechocystis]] | ||
| + | *** [[manual-primary_network]] | ||
| + | *** [[orthology-creinhardtii]] | ||
| + | * [[GLYOHMETRANS-RXN]] | ||
| + | ** 4 associated gene(s): | ||
| + | *** [[Tiso_gene_16153]] | ||
| + | *** [[Tiso_gene_7776]] | ||
| + | *** [[Tiso_gene_18652]] | ||
| + | *** [[Tiso_gene_16154]] | ||
| + | ** 4 reconstruction source(s) associated: | ||
| + | *** [[annotation-experimental_annotation]] | ||
| + | *** [[manual-primary_network]] | ||
| + | *** [[annotation-in-silico_annotation]] | ||
| + | *** [[orthology-esiliculosus]] | ||
| + | * [[MALATE-DEH-RXN]] | ||
| + | ** 2 associated gene(s): | ||
| + | *** [[Tiso_gene_2323]] | ||
| + | *** [[Tiso_gene_1990]] | ||
| + | ** 7 reconstruction source(s) associated: | ||
| + | *** [[annotation-experimental_annotation]] | ||
| + | *** [[orthology-esiliculosus]] | ||
| + | *** [[annotation-in-silico_annotation]] | ||
| + | *** [[orthology-athaliana]] | ||
| + | *** [[orthology-synechocystis]] | ||
| + | *** [[manual-primary_network]] | ||
| + | *** [[orthology-creinhardtii]] | ||
| + | * [[RXN-15513]] | ||
| + | ** 8 associated gene(s): | ||
| + | *** [[Tiso_gene_7201]] | ||
| + | *** [[Tiso_gene_14530]] | ||
| + | *** [[Tiso_gene_16271]] | ||
| + | *** [[Tiso_gene_9922]] | ||
| + | *** [[Tiso_gene_2841]] | ||
| + | *** [[Tiso_gene_2365]] | ||
| + | *** [[Tiso_gene_14664]] | ||
| + | *** [[Tiso_gene_9923]] | ||
| + | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-experimental_annotation]] | ||
| + | *** [[annotation-in-silico_annotation]] | ||
| + | * [[RXN-2881]] | ||
| + | ** 0 associated gene: | ||
| + | ** 1 reconstruction source(s) associated: | ||
| + | *** [[annotation-in-silico_annotation]] | ||
== Reaction(s) not found == | == Reaction(s) not found == | ||
| − | * | + | * [http://metacyc.org/META/NEW-IMAGE?object=GKI-RXN GKI-RXN] |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | * [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPYRUVATE-REDUCTASE-RXN HYDROXYPYRUVATE-REDUCTASE-RXN] |
| + | * [http://metacyc.org/META/NEW-IMAGE?object=MALATE--COA-LIGASE-RXN MALATE--COA-LIGASE-RXN] | ||
| + | * [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN] | ||
| + | * [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOX-RXN PEPCARBOX-RXN] | ||
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-2802 RXN-2802] | ||
| + | * [http://metacyc.org/META/NEW-IMAGE?object=SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] | ||
| + | * [http://metacyc.org/META/NEW-IMAGE?object=SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN] | ||
== External links == | == External links == | ||
{{#set: taxonomic range=TAX-2}} | {{#set: taxonomic range=TAX-2}} | ||
| − | {{#set: common name= | + | {{#set: common name=formaldehyde assimilation I (serine pathway)}} |
| − | {{#set: | + | {{#set: reaction found=5}} |
| − | {{#set: reaction | + | {{#set: total reaction=13}} |
| − | {{#set: | + | {{#set: completion rate=38.0}} |
Latest revision as of 20:20, 21 March 2018
Pathway PWY-1622
- taxonomic range:
- common name:
- formaldehyde assimilation I (serine pathway)
- Synonym(s):
Reaction(s) found
5 reactions found over 13 reactions in the full pathway
- 2PGADEHYDRAT-RXN
- 4 associated gene(s):
- 7 reconstruction source(s) associated:
- GLYOHMETRANS-RXN
- 4 associated gene(s):
- 4 reconstruction source(s) associated:
- MALATE-DEH-RXN
- 2 associated gene(s):
- 7 reconstruction source(s) associated:
- RXN-15513
- 8 associated gene(s):
- 2 reconstruction source(s) associated:
- RXN-2881
- 0 associated gene:
- 1 reconstruction source(s) associated:
Reaction(s) not found
- GKI-RXN
- HYDROXYPYRUVATE-REDUCTASE-RXN
- MALATE--COA-LIGASE-RXN
- MALYL-COA-LYASE-RXN
- PEPCARBOX-RXN
- RXN-2802
- SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN
- SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN
