Difference between revisions of "PWY-361"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13614 RXN-13614] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** acyl...")
(Created page with "Category:Gene == Gene Tiso_gene_19622 == * left end position: ** 203 * transcription direction: ** POSITIVE * right end position: ** 2037 * centisome position: ** 9.385114...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13614 RXN-13614] ==
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== Gene Tiso_gene_19622 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 203
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* common name:
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* transcription direction:
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** polyketide_synthase
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** POSITIVE
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** acyl-_synthetase
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* right end position:
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** ORF
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** 2037
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** long_chain_acyl-_synthetase
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* centisome position:
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* ec number:
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** 9.385114   
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-11839]]
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** 1 [[CPD-3617]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CPD-10267]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 decanoate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 decanoyl-CoA[c]
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* [[RXN-11840]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-11841]]
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* [[Tiso_gene_7855]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***automated-name-match
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***EC-NUMBER
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* [[RXN-11842]]
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* [[Tiso_gene_136]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***automated-name-match
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***EC-NUMBER
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* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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* [[Tiso_gene_135]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***automated-name-match
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***EC-NUMBER
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** experimental_annotation
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* [[Tiso_gene_9394]]
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***automated-name-match
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13394]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_348]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4191]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=203}}
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{{#set: common name=polyketide_synthase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=acyl-_synthetase}}
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{{#set: right end position=2037}}
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{{#set: common name=ORF}}
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{{#set: centisome position=9.385114    }}
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{{#set: common name=long_chain_acyl-_synthetase}}
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{{#set: reaction associated=RXN-11839|RXN-11840|RXN-11841|RXN-11842|TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: gene associated=Tiso_gene_7855|Tiso_gene_136|Tiso_gene_135|Tiso_gene_9394|Tiso_gene_13394|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_348|Tiso_gene_4191}}
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{{#set: in pathway=PWY-7094}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:00, 18 March 2018

Gene Tiso_gene_19622

  • left end position:
    • 203
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2037
  • centisome position:
    • 9.385114
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-361&oldid=21231"