Difference between revisions of "PWY-3821"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14209 RXN-14209] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.2...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14209 RXN-14209] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
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** D-galactose degradation III
 
* Synonym(s):
 
* Synonym(s):
 +
** UDP-D-galatose biosynthesis (from D-galactose)
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''3''' reactions in the full pathway
** 1 [[NADP]][c] '''+''' 1 [[4-AMINO-BUTYRALDEHYDE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[4-AMINO-BUTYRATE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADPH]][c]
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* [[GALACTOKIN-RXN]]
* With common name(s):
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** 5 associated gene(s):
** 1 NADP+[c] '''+''' 1 4-aminobutanal[c] '''+''' 1 H2O[c] '''<=>''' 1 4-aminobutanoate[c] '''+''' 2 H+[c] '''+''' 1 NADPH[c]
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*** [[Tiso_gene_11795]]
 
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*** [[Tiso_gene_12191]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_5041]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_10797]]
* Gene: [[Tiso_gene_7322]]
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*** [[Tiso_gene_5042]]
** Source: [[orthology-athaliana]]
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** 5 reconstruction source(s) associated:
** Source: [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
* Gene: [[Tiso_gene_3513]]
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*** [[orthology-athaliana]]
** Source: [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
== Pathways  ==
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*** [[orthology-esiliculosus]]
== Reconstruction information  ==
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*** [[annotation-experimental_annotation]]
* Category: [[orthology]]
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* [[UDPGLUCEPIM-RXN]]
** Source: [[orthology-athaliana]]
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** 4 associated gene(s):
*** Tool: [[pantograph]]
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*** [[Tiso_gene_9823]]
** Source: [[orthology-esiliculosus]]
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*** [[Tiso_gene_15395]]
*** Tool: [[pantograph]]
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*** [[Tiso_gene_3236]]
 +
*** [[Tiso_gene_10797]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[UTPHEXPURIDYLYLTRANS-RXN]]
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** 6 associated gene(s):
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*** [[Tiso_gene_9110]]
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*** [[Tiso_gene_6457]]
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*** [[Tiso_gene_6459]]
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*** [[Tiso_gene_14796]]
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*** [[Tiso_gene_17566]]
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*** [[Tiso_gene_6458]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
* RHEA:
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* ARACYC:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30806 30806]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3821 PWY-3821]
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-3193}}
** [http://www.genome.jp/dbget-bin/www_bget?R01986 R01986]
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{{#set: common name=D-galactose degradation III}}
{{#set: direction=REVERSIBLE}}
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{{#set: common name=UDP-D-galatose biosynthesis (from D-galactose)}}
{{#set: ec number=EC-1.2.1}}
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{{#set: reaction found=3}}
{{#set: gene associated=Tiso_gene_7322|Tiso_gene_3513}}
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{{#set: total reaction=3}}
{{#set: in pathway=}}
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{{#set: completion rate=100.0}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:17, 21 March 2018

Pathway PWY-3821

  • taxonomic range:
  • common name:
    • D-galactose degradation III
  • Synonym(s):
    • UDP-D-galatose biosynthesis (from D-galactose)

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links