Difference between revisions of "PWY-4302"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-484 RXN66-484] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-484 RXN66-484] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** polyketide_synthase
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** aerobic respiration III (alternative oxidase pathway)
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** ORF
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** acyl-_synthetase
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** long_chain_acyl-_synthetase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
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** alternative oxidase pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''3''' reactions in the full pathway
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** 1 [[PRISTANATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CPD-14675]][c]
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* [[NADH-DEHYDROG-A-RXN]]
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* With common name(s):
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** 18 associated gene(s):
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** 1 pristanate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 pristanoyl-CoA[c]
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*** [[Tiso_gene_13075]]
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*** [[Tiso_gene_4836]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_5171]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_359]]
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* [[Tiso_gene_500]]
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*** [[Tiso_gene_15276]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_10326]]
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***EC-NUMBER
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*** [[Tiso_gene_18831]]
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* [[Tiso_gene_9394]]
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*** [[Tiso_gene_4894]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_9874]]
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***EC-NUMBER
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*** [[Tiso_gene_18172]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_18339]]
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***EC-NUMBER
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*** [[Tiso_gene_19691]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_2949]]
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* [[Tiso_gene_348]]
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*** [[Tiso_gene_17199]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_18707]]
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***EC-NUMBER
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*** [[Tiso_gene_3113]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_355]]
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***EC-NUMBER
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*** [[Tiso_gene_358]]
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* [[Tiso_gene_135]]
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** 4 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** [[manual-primary_network]]
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* [[Tiso_gene_13394]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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* [[RXN-6883]]
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* [[Tiso_gene_136]]
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** 4 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_7486]]
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***EC-NUMBER
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*** [[Tiso_gene_17130]]
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* [[Tiso_gene_4191]]
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*** [[Tiso_gene_7953]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_8278]]
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***EC-NUMBER
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** 3 reconstruction source(s) associated:
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** EXPERIMENTAL_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_10876]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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***EC-NUMBER
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** 0 associated gene:
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* [[Tiso_gene_7855]]
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** 1 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[manual-primary_network]]
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***EC-NUMBER
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== Reaction(s) not found ==
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ARACYC:
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{{#set: common name=polyketide_synthase}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-4302 PWY-4302]
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{{#set: common name=ORF}}
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{{#set: taxonomic range=TAX-33682}}
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{{#set: common name=acyl-_synthetase}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: common name=long_chain_acyl-_synthetase}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=aerobic respiration III (alternative oxidase pathway)}}
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{{#set: gene associated=Tiso_gene_500|Tiso_gene_9394|Tiso_gene_348|Tiso_gene_135|Tiso_gene_13394|Tiso_gene_136|Tiso_gene_4191|Tiso_gene_10876|Tiso_gene_7855}}
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{{#set: common name=alternative oxidase pathway}}
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{{#set: in pathway=}}
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{{#set: reaction found=3}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: total reaction=3}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:44, 21 March 2018

Pathway PWY-4302

  • taxonomic range:
  • common name:
    • aerobic respiration III (alternative oxidase pathway)
  • Synonym(s):
    • alternative oxidase pathway

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-4302&oldid=43538"