Difference between revisions of "PWY-4381"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.148-RXN 2.7.1.148-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-diphosphocytidyl-...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7139 CPD-7139] == * smiles: ** C(O)C1(C(O)C(O)C(O)C(O1)OC5(C4(C=C(OC2(C(O)C(O)C(O)C(CO)O2))...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.148-RXN 2.7.1.148-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7139 CPD-7139] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(O)C1(C(O)C(O)C(O)C(O1)OC5(C4(C=C(OC2(C(O)C(O)C(O)C(CO)O2))C(C3(C=C(O)C(O)=C(O)C=3))=[O+]C=4C=C([O-])C=5)))
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* inchi key:
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** InChIKey=XCTGXGVGJYACEI-LCENJUANSA-N
 
* common name:
 
* common name:
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** 4-diphosphocytidyl-2-c-methyl-d-erythritol_kinase
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** delphinidin 3,5-di-O-β-D-glucoside
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.7.1.148 EC-2.7.1.148]
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** 626.524   
 
* Synonym(s):
 
* Synonym(s):
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** delphinidin-3,5-diglucoside
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-8228]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13463]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18437 18437]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25201902 25201902]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R05634 R05634]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=77838 77838]
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=4-diphosphocytidyl-2-c-methyl-d-erythritol_kinase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C16312 C16312]
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{{#set: ec number=EC-2.7.1.148}}
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* HMDB : HMDB30693
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{{#set: gene associated=Tiso_gene_13463}}
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{{#set: smiles=C(O)C1(C(O)C(O)C(O)C(O1)OC5(C4(C=C(OC2(C(O)C(O)C(O)C(CO)O2))C(C3(C=C(O)C(O)=C(O)C=3))=[O+]C=4C=C([O-])C=5)))}}
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{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
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{{#set: inchi key=InChIKey=XCTGXGVGJYACEI-LCENJUANSA-N}}
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{{#set: reconstruction category=orthology}}
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{{#set: common name=delphinidin 3,5-di-O-β-D-glucoside}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: molecular weight=626.524    }}
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{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
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{{#set: common name=delphinidin-3,5-diglucoside}}
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{{#set: reconstruction category=manual}}
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{{#set: produced by=RXN-8228}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:38, 10 January 2018

Metabolite CPD-7139

  • smiles:
    • C(O)C1(C(O)C(O)C(O)C(O1)OC5(C4(C=C(OC2(C(O)C(O)C(O)C(CO)O2))C(C3(C=C(O)C(O)=C(O)C=3))=[O+]C=4C=C([O-])C=5)))
  • inchi key:
    • InChIKey=XCTGXGVGJYACEI-LCENJUANSA-N
  • common name:
    • delphinidin 3,5-di-O-β-D-glucoside
  • molecular weight:
    • 626.524
  • Synonym(s):
    • delphinidin-3,5-diglucoside

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(O)C1(C(O)C(O)C(O)C(O1)OC5(C4(C=C(OC2(C(O)C(O)C(O)C(CO)O2))C(C3(C=C(O)C(O)=C(O)C=3))=[O+]C=4C=C([O-])C=5)))" cannot be used as a page name in this wiki.



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