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| Line 1: |
Line 1: |
| − | [[Category:Gene]] | + | [[Category:Pathway]] |
| − | == Gene Tiso_gene_17451 == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-4661 PWY-4661] == |
| − | * right end position: | + | * taxonomic range: |
| − | ** 3077 | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090] |
| − | * transcription direction:
| + | * common name: |
| − | ** NEGATIVE | + | ** 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) |
| − | * left end position:
| + | |
| − | ** 667 | + | |
| − | * centisome position:
| + | |
| − | ** 18.06609
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** lipid-independent phytic acid biosynthesis |
| | + | ** lipid-independent InsP6 biosynthesis |
| | + | ** lipid-independent phytate biosynthesis |
| | + | ** hexakisphosphate biosynthesis (lipid-independent) |
| | + | ** phytate biosynthesis |
| | | | |
| − | == Reactions associated == | + | == Reaction(s) found == |
| − | * Reaction: [[ACETYL-COA-ACETYLTRANSFER-RXN]]
| + | '''3''' reactions found over '''7''' reactions in the full pathway |
| − | ** Source: [[orthology-synechocystis]]
| + | * [[2.7.1.134-RXN]] |
| − | ** Source: [[orthology-esiliculosus]]
| + | ** 1 associated gene(s): |
| − | * Reaction: [[KETOACYLCOATHIOL-RXN]]
| + | *** [[Tiso_gene_15232]] |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | ** 2 reconstruction source(s) associated: |
| − | *** Assignment: ec-number | + | *** [[annotation-in-silico_annotation]] |
| − | ** Source: [[annotation-experimental_annotation]]
| + | *** [[orthology-esiliculosus]] |
| − | *** Assignment: ec-number
| + | * [[MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN]] |
| − | * Reaction: [[METHYLACETOACETYLCOATHIOL-RXN]]
| + | ** 1 associated gene(s): |
| − | ** Source: [[orthology-esiliculosus]] | + | *** [[Tiso_gene_7167]] |
| − | * Reaction: [[RXN-10699]] | + | ** 3 reconstruction source(s) associated: |
| − | ** Source: [[annotation-in-silico_annotation]] | + | *** [[annotation-in-silico_annotation]] |
| − | *** Assignment: ec-number | + | *** [[annotation-experimental_annotation]] |
| − | ** Source: [[annotation-experimental_annotation]] | + | *** [[orthology-esiliculosus]] |
| − | *** Assignment: ec-number | + | * [[RXN-7163]] |
| − | * Reaction: [[RXN-10700]]
| + | ** 1 associated gene(s): |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | *** [[Tiso_gene_15282]] |
| − | *** Assignment: ec-number | + | ** 1 reconstruction source(s) associated: |
| − | ** Source: [[annotation-experimental_annotation]]
| + | *** [[orthology-esiliculosus]] |
| − | *** Assignment: ec-number
| + | == Reaction(s) not found == |
| − | * Reaction: [[RXN-10701]]
| + | * [http://metacyc.org/META/NEW-IMAGE?object=MYO-INOSITOL-1-KINASE-RXN MYO-INOSITOL-1-KINASE-RXN] |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-7202 RXN-7202] |
| − | *** Assignment: ec-number
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-7203 RXN-7203] |
| − | ** Source: [[annotation-experimental_annotation]]
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-7204 RXN-7204] |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-11246]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-12561]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | * Reaction: [[RXN-12565]] | + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-12710]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: ec-number | + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number | + | |
| − | * Reaction: [[RXN-13617]] | + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: ec-number | + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number | + | |
| − | * Reaction: [[RXN-14268]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-14274]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: ec-number | + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number | + | |
| − | * Reaction: [[RXN-14277]] | + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-14394]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-14774]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-14788]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-14793]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-14799]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-14803]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-16137]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-17116]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-17778]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-17782]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-17787]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-17791]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-17795]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | * Reaction: [[RXN-17799]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | ** Source: [[annotation-experimental_annotation]]
| + | |
| − | *** Assignment: ec-number
| + | |
| − | == Pathways associated ==
| + | |
| − | * [[P162-PWY]]
| + | |
| − | * [[PWY-5177]]
| + | |
| − | * [[PWY-6583]]
| + | |
| − | * [[P163-PWY]]
| + | |
| − | * [[PWY-6883]]
| + | |
| − | * [[PWY-5676]]
| + | |
| − | * [[PWY-5136]]
| + | |
| − | * [[PWY-7778]]
| + | |
| − | * [[PWY-7779]]
| + | |
| − | * [[PWY-6588]]
| + | |
| − | * [[PWY-7288]]
| + | |
| − | * [[PWY-6174]]
| + | |
| − | * [[PWY-7340]]
| + | |
| − | * [[PWY-7337]]
| + | |
| − | * [[PWY-7094]]
| + | |
| − | * [[PWY-7654]]
| + | |
| − | * [[PWY66-391]]
| + | |
| − | * [[PWY-5789]]
| + | |
| − | * [[FAO-PWY]]
| + | |
| − | * [[PWY-6876]]
| + | |
| − | * [[CENTFERM-PWY]]
| + | |
| − | * [[PWY-6945]]
| + | |
| − | * [[PWY-7391]]
| + | |
| − | * [[PWY-5741]]
| + | |
| − | * [[PWY-5109]]
| + | |
| − | * [[PWY1-3]]
| + | |
| − | * [[ACETOACETATE-DEG-PWY]]
| + | |
| − | * [[PWY-6948]]
| + | |
| − | * [[PWY-7726]]
| + | |
| − | * [[PWY66-367]]
| + | |
| − | * [[PWY-6435]]
| + | |
| − | * [[ILEUDEG-PWY]]
| + | |
| − | * [[PWY-7216]]
| + | |
| − | * [[PWY-922]]
| + | |
| − | * [[PWY-7606]]
| + | |
| − | * [[PWY-7338]]
| + | |
| − | * [[PWY66-368]]
| + | |
| − | * [[PWY-7339]]
| + | |
| − | * [[PWY-6946]]
| + | |
| − | * [[PWY-735]]
| + | |
| − | * [[PWY-7401]]
| + | |
| − | * [[PWY-6863]]
| + | |
| − | * [[PWY-7524]]
| + | |
| | == External links == | | == External links == |
| − | {{#set: right end position=3077}} | + | {{#set: taxonomic range=TAX-33090}} |
| − | {{#set: transcription direction=NEGATIVE}} | + | {{#set: common name=1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)}} |
| − | {{#set: left end position=667}} | + | {{#set: common name=lipid-independent phytic acid biosynthesis|lipid-independent InsP6 biosynthesis|lipid-independent phytate biosynthesis|hexakisphosphate biosynthesis (lipid-independent)|phytate biosynthesis}} |
| − | {{#set: centisome position=18.06609 }} | + | {{#set: reaction found=3}} |
| − | {{#set: reaction associated=ACETYL-COA-ACETYLTRANSFER-RXN|KETOACYLCOATHIOL-RXN|METHYLACETOACETYLCOATHIOL-RXN|RXN-10699|RXN-10700|RXN-10701|RXN-11246|RXN-12561|RXN-12565|RXN-12710|RXN-13617|RXN-14268|RXN-14274|RXN-14277|RXN-14394|RXN-14774|RXN-14788|RXN-14793|RXN-14799|RXN-14803|RXN-16137|RXN-17116|RXN-17778|RXN-17782|RXN-17787|RXN-17791|RXN-17795|RXN-17799}} | + | {{#set: total reaction=7}} |
| − | {{#set: pathway associated=P162-PWY|PWY-5177|PWY-6583|P163-PWY|PWY-6883|PWY-5676|PWY-5136|PWY-7778|PWY-7779|PWY-6588|PWY-7288|PWY-6174|PWY-7340|PWY-7337|PWY-7094|PWY-7654|PWY66-391|PWY-5789|FAO-PWY|PWY-6876|CENTFERM-PWY|PWY-6945|PWY-7391|PWY-5741|PWY-5109|PWY1-3|ACETOACETATE-DEG-PWY|PWY-6948|PWY-7726|PWY66-367|PWY-6435|ILEUDEG-PWY|PWY-7216|PWY-922|PWY-7606|PWY-7338|PWY66-368|PWY-7339|PWY-6946|PWY-735|PWY-7401|PWY-6863|PWY-7524}} | + | {{#set: completion rate=43.0}} |
