Difference between revisions of "PWY-5041"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_6150 == * left end position: ** 3 * transcription direction: ** POSITIVE * right end position: ** 1286 * centisome position: ** 1.646632600...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATESYN-RXN GLUTAMATESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredoxin-de...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_6150 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATESYN-RXN GLUTAMATESYN-RXN] ==
−
* left end position:
+
* direction:
−
** 3
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits
−
* right end position:
+
** glutamate_synthase
−
** 1286
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/1.4.1.13 EC-1.4.1.13]
−
** 1.646632600e-2
+
 
* Synonym(s):
 
* Synonym(s):
−
** CA
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[CARBODEHYDRAT-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[NADP]][c] '''+''' 2 [[GLT]][c]
−
***ec-number
+
* With common name(s):
−
** experimental_annotation
+
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 L-glutamine[c] '''=>''' 1 NADP+[c] '''+''' 2 L-glutamate[c]
−
***ec-number
+
 
−
** [[pantograph]]-[[esiliculosus]]
+
== Genes associated with this reaction  ==
−
** [[pantograph]]-[[creinhardtii]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[RXN0-5224]]
+
* Gene: [[Tiso_gene_11511]]
−
** in-silico_annotation
+
** Source: [[annotation-experimental_annotation]]
−
***ec-number
+
*** Assignment: EC-NUMBER
−
** experimental_annotation
+
* Gene: [[Tiso_gene_2581]]
−
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
== Pathways associated ==
+
** Source: [[annotation-experimental_annotation]]
−
* [[PWY-241]]
+
*** Assignment: EC-NUMBER
−
* [[PWYQT-4429]]
+
** Source: [[orthology-athaliana]]
−
* [[PWY-7117]]
+
** Source: [[orthology-esiliculosus]]
−
* [[PWY-7115]]
+
* Gene: [[Tiso_gene_1154]]
−
* [[PWY-6142]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[CYANCAT-PWY]]
+
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[GLUTAMINEFUM-PWY]], L-glutamine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINEFUM-PWY GLUTAMINEFUM-PWY]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[GLUTSYN-PWY]], L-glutamate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYN-PWY GLUTSYN-PWY]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=3}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15501 15501]
−
{{#set: right end position=1286}}
+
* LIGAND-RXN:
−
{{#set: centisome position=1.646632600e-2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00114 R00114]
−
{{#set: common name=CA}}
+
* UNIPROT:
−
{{#set: reaction associated=CARBODEHYDRAT-RXN|RXN0-5224}}
+
** [http://www.uniprot.org/uniprot/Q05756 Q05756]
−
{{#set: pathway associated=PWY-241|PWYQT-4429|PWY-7117|PWY-7115|PWY-6142|CYANCAT-PWY}}
+
** [http://www.uniprot.org/uniprot/Q05755 Q05755]
 +
** [http://www.uniprot.org/uniprot/Q9PJA4 Q9PJA4]
 +
** [http://www.uniprot.org/uniprot/Q9PJA2 Q9PJA2]
 +
** [http://www.uniprot.org/uniprot/Q9CG25 Q9CG25]
 +
** [http://www.uniprot.org/uniprot/Q58746 Q58746]
 +
** [http://www.uniprot.org/uniprot/P09831 P09831]
 +
** [http://www.uniprot.org/uniprot/Q9CG24 Q9CG24]
 +
** [http://www.uniprot.org/uniprot/P09832 P09832]
 +
** [http://www.uniprot.org/uniprot/P39812 P39812]
 +
** [http://www.uniprot.org/uniprot/Q9S2Y9 Q9S2Y9]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits}}
 +
{{#set: common name=glutamate_synthase}}
 +
{{#set: ec number=EC-1.4.1.13}}
 +
{{#set: gene associated=Tiso_gene_11511|Tiso_gene_2581|Tiso_gene_1154}}
 +
{{#set: in pathway=GLUTAMINEFUM-PWY|GLUTSYN-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:52, 21 March 2018

Reaction GLUTAMATESYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ferredoxin-dependent_glutamate_fusion_of_large_and_small_subunits
    • glutamate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADPH[c] + 1 2-oxoglutarate[c] + 1 L-glutamine[c] => 1 NADP+[c] + 2 L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5041&oldid=30865"