Difference between revisions of "PWY-5101"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12398 RXN-12398] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XXLG oligosaccha...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183924 TAX-...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12398 RXN-12398] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183924 TAX-183924]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-203691 TAX-203691]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
 
* common name:
 
* common name:
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** xyloglucan XXLG oligosaccharide β-galactosidase
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** L-isoleucine biosynthesis II
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** glycoside_hydrolase
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** polyprotein
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* ec number:
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** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''8''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[CPD-13376]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[CPD-13375]][c]
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* [[ACETOOHBUTSYN-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 H2O[c] '''+''' 1 XXLG xyloglucan oligosaccharide[c] '''=>''' 1 D-galactopyranose[c] '''+''' 1 XXXG xyloglucan oligosaccharide[c]
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*** [[Tiso_gene_11362]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[manual-primary_network]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_17558]]
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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** IN-SILICO_ANNOTATION
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** 3 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_14984]]
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* [[Tiso_gene_1398]]
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*** [[Tiso_gene_18403]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_17748]]
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***EC-NUMBER
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** 7 reconstruction source(s) associated:
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_12839]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[orthology-athaliana]]
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== Pathways  ==
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*** [[orthology-synechocystis]]
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* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
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*** [[manual-primary_network]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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*** [[orthology-creinhardtii]]
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== Reconstruction information  ==
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* [[DIHYDROXYMETVALDEHYDRAT-RXN]]
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* [[orthology]]:
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** 1 associated gene(s):
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** [[pantograph]]:
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*** [[Tiso_gene_1563]]
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*** [[esiliculosus]]
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** 6 reconstruction source(s) associated:
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* [[annotation]]:
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*** [[annotation-experimental_annotation]]
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** [[pathwaytools]]:
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*** [[orthology-esiliculosus]]
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*** [[in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN-7743]]
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** 1 associated gene(s):
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*** [[Tiso_gene_11453]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-synechocystis]]
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* [[RXN-7745]]
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** 1 associated gene(s):
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*** [[Tiso_gene_2920]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R-2-METHYLMALATE-DEHYDRATASE-RXN R-2-METHYLMALATE-DEHYDRATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16062 RXN-16062]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7744 RXN-7744]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-183924}}
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{{#set: common name=xyloglucan XXLG oligosaccharide β-galactosidase}}
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{{#set: taxonomic range=TAX-224756}}
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{{#set: common name=glycoside_hydrolase}}
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{{#set: taxonomic range=TAX-183925}}
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{{#set: common name=polyprotein}}
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{{#set: taxonomic range=TAX-203691}}
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{{#set: ec number=EC-3.2.1.23}}
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{{#set: taxonomic range=TAX-183939}}
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{{#set: gene associated=Tiso_gene_17558|Tiso_gene_1398|Tiso_gene_12839}}
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{{#set: common name=L-isoleucine biosynthesis II}}
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{{#set: in pathway=PWY-6807}}
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{{#set: reaction found=5}}
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{{#set: reconstruction category=orthology}}
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{{#set: total reaction=8}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: completion rate=63.0}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:05, 21 March 2018

Pathway PWY-5101

Reaction(s) found

5 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5101&oldid=39388"