Difference between revisions of "PWY-5109"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Cerebrosides Cerebrosides] == * common name: ** a cerebroside * Synonym(s): ** a monoglycosylce...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISPH2-RXN ISPH2-RXN] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** ORF |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.17.7.4 EC-1.17.7.4] | ||
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | == | + | ** 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[WATER]][c] |
| − | * [[ | + | * With common name(s): |
| − | == | + | ** 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] '''+''' 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 isopentenyl diphosphate[c] '''+''' 1 H2O[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[Tiso_gene_5609]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | ** EXPERIMENTAL_ANNOTATION | ||
| + | ***EC-NUMBER | ||
| + | ** [[pantograph]]-[[athaliana]] | ||
| + | ** [[pantograph]]-[[synechocystis]] | ||
| + | ** [[pantograph]]-[[esiliculosus]] | ||
| + | == Pathways == | ||
| + | * [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY] | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560] | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * [[orthology]]: | ||
| + | ** [[pantograph]]: | ||
| + | *** [[synechocystis]] | ||
| + | *** [[athaliana]] | ||
| + | *** [[esiliculosus]] | ||
| + | * [[manual]]: | ||
| + | ** [[primary_network]] | ||
| + | * [[annotation]]: | ||
| + | ** [[pathwaytools]]: | ||
| + | *** [[experimental_annotation]] | ||
| + | *** [[in-silico_annotation]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: common name= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R08209 R08209] |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R05884 R05884] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| + | {{#set: common name=ORF}} | ||
| + | {{#set: ec number=EC-1.17.7.4}} | ||
| + | {{#set: gene associated=Tiso_gene_5609}} | ||
| + | {{#set: in pathway=NONMEVIPP-PWY|PWY-7560}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
| + | {{#set: reconstruction source=synechocystis|athaliana|esiliculosus}} | ||
| + | {{#set: reconstruction category=manual}} | ||
| + | {{#set: reconstruction source=primary_network}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
| + | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}} | ||
Revision as of 17:19, 10 January 2018
Contents
Reaction ISPH2-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 HYDROXY-METHYL-BUTENYL-DIP[c] + 2 PROTON[c] + 2 Reduced-ferredoxins[c] => 2 Oxidized-ferredoxins[c] + 1 DELTA3-ISOPENTENYL-PP[c] + 1 WATER[c]
- With common name(s):
- 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] + 2 H+[c] + 2 a reduced ferredoxin [iron-sulfur] cluster[c] => 2 an oxidized ferredoxin [iron-sulfur] cluster[c] + 1 isopentenyl diphosphate[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_5609
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-athaliana
- pantograph-synechocystis
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
Pathways
- NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
- 9 reactions found over 9 reactions in the full pathway
- PWY-7560, methylerythritol phosphate pathway II: PWY-7560
- 9 reactions found over 9 reactions in the full pathway
Reconstruction information
External links
