Difference between revisions of "PWY-5143"

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(Created page with "Category:Gene == Gene Tiso_gene_1612 == * left end position: ** 383 * transcription direction: ** NEGATIVE * right end position: ** 3491 * centisome position: ** 0.8684216...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX...")
Line 1: Line 1:
[[Category:Gene]]
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[[Category:Pathway]]
== Gene Tiso_gene_1612 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY] ==
* left end position:
+
* taxonomic range:
** 383
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
* transcription direction:
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* common name:
** NEGATIVE
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** pyridoxal 5'-phosphate biosynthesis I
* right end position:
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** 3491
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* centisome position:
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** 0.8684216   
+
 
* Synonym(s):
 
* Synonym(s):
 +
** vitamin B6 biosynthesis
  
== Reactions associated ==
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== Reaction(s) found ==
* [[ACETATE--COA-LIGASE-RXN]]
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'''3''' reactions found over '''8''' reactions in the full pathway
** in-silico_annotation
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* [[DXS-RXN]]
***ec-number
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** 1 associated gene(s):
** experimental_annotation
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*** [[Tiso_gene_17311]]
***ec-number
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** 7 reconstruction source(s) associated:
** [[pantograph]]-[[synechocystis]]
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*** [[annotation-experimental_annotation]]
** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
** [[pantograph]]-[[creinhardtii]]
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*** [[annotation-in-silico_annotation]]
== Pathways associated ==
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*** [[orthology-athaliana]]
* [[PWY66-161]]
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*** [[orthology-synechocystis]]
* [[PWY66-21]]
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*** [[manual-primary_network]]
* [[PWY66-162]]
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*** [[orthology-creinhardtii]]
* [[PWY0-1313]]
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* [[PNPOXI-RXN]]
* [[PWY-6672]]
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** 1 associated gene(s):
* [[PWY-7118]]
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*** [[Tiso_gene_1471]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[PSERTRANSAMPYR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_17123]]
 +
*** [[Tiso_gene_15686]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.262-RXN 1.1.1.262-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ERYTH4PDEHYDROG-RXN ERYTH4PDEHYDROG-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ERYTHRON4PDEHYDROG-RXN ERYTHRON4PDEHYDROG-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PDXJ-RXN PDXJ-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8447 RXN-8447]
 
== External links  ==
 
== External links  ==
{{#set: left end position=383}}
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* ECOCYC:
{{#set: transcription direction=NEGATIVE}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY]
{{#set: right end position=3491}}
+
{{#set: taxonomic range=TAX-2}}
{{#set: centisome position=0.8684216    }}
+
{{#set: common name=pyridoxal 5'-phosphate biosynthesis I}}
{{#set: reaction associated=ACETATE--COA-LIGASE-RXN}}
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{{#set: common name=vitamin B6 biosynthesis}}
{{#set: pathway associated=PWY66-161|PWY66-21|PWY66-162|PWY0-1313|PWY-6672|PWY-7118}}
+
{{#set: reaction found=3}}
 +
{{#set: total reaction=8}}
 +
{{#set: completion rate=38.0}}

Revision as of 15:47, 21 March 2018

Pathway PYRIDOXSYN-PWY

  • taxonomic range:
  • common name:
    • pyridoxal 5'-phosphate biosynthesis I
  • Synonym(s):
    • vitamin B6 biosynthesis

Reaction(s) found

3 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links