Difference between revisions of "PWY-5154"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-DIPHOSPHATASE-RXN GUANOSINE-DIPHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Gene == Gene Tiso_gene_17566 == * right end position: ** 2739 * transcription direction: ** POSITIVE * left end position: ** 23 * centisome position: ** 0.6369427...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-DIPHOSPHATASE-RXN GUANOSINE-DIPHOSPHATASE-RXN] ==
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== Gene Tiso_gene_17566 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 2739
* common name:
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* transcription direction:
** ORF
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** POSITIVE
* ec number:
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* left end position:
** [http://enzyme.expasy.org/EC/3.6.1.42 EC-3.6.1.42]
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** 23
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* centisome position:
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** 0.6369427   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[GLUC1PURIDYLTRANS-RXN]]
** 1 [[GDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-in-silico_annotation]]
* With common name(s):
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*** Assignment: ec-number
** 1 GDP[c] '''+''' 1 H2O[c] '''=>''' 1 GMP[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
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** Source: [[annotation-experimental_annotation]]
 
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*** Assignment: ec-number
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_12899]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_20236]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
*** Tool: [[pantograph]]
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* Reaction: [[UG1PUT]]
* Category: [[annotation]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[UTPHEXPURIDYLYLTRANS-RXN]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
** Source: [[annotation-in-silico_annotation]]
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== Pathways associated ==
*** Tool: [[pathwaytools]]
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* [[PWY-7238]]
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* [[PWY-7343]]
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* [[PWY-3801]]
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* [[PWY-3821]]
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* [[PWY-7817]]
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* [[PWY-6527]]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: right end position=2739}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22156 22156]
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{{#set: transcription direction=POSITIVE}}
* LIGAND-RXN:
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{{#set: left end position=23}}
** [http://www.genome.jp/dbget-bin/www_bget?R00328 R00328]
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{{#set: centisome position=0.6369427    }}
* UNIPROT:
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{{#set: reaction associated=GLUC1PURIDYLTRANS-RXN|UG1PUT|UTPHEXPURIDYLYLTRANS-RXN}}
** [http://www.uniprot.org/uniprot/P32621 P32621]
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{{#set: pathway associated=PWY-7238|PWY-7343|PWY-3801|PWY-3821|PWY-7817|PWY-6527}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.6.1.42}}
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{{#set: gene associated=Tiso_gene_12899|Tiso_gene_20236}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:00, 21 March 2018

Gene Tiso_gene_17566

  • right end position:
    • 2739
  • transcription direction:
    • POSITIVE
  • left end position:
    • 23
  • centisome position:
    • 0.6369427
  • Synonym(s):

Reactions associated

Pathways associated

External links