Difference between revisions of "PWY-5154"

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(Created page with "Category:Gene == Gene Tiso_gene_13306 == * left end position: ** 3486 * transcription direction: ** POSITIVE * right end position: ** 6380 * centisome position: ** 54.5710...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
+
[[Category:Pathway]]
== Gene Tiso_gene_13306 ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154] ==
* left end position:
+
* taxonomic range:
** 3486
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
* transcription direction:
+
* common name:
** POSITIVE
+
** L-arginine biosynthesis III (via N-acetyl-L-citrulline)
* right end position:
+
** 6380
+
* centisome position:
+
** 54.571068   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction(s) found ==
* [[3.2.1.21-RXN]]
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'''7''' reactions found over '''9''' reactions in the full pathway
** in-silico_annotation
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* [[ACETYLGLUTKIN-RXN]]
***ec-number
+
** 1 associated gene(s):
* [[RXN-10769]]
+
*** [[Tiso_gene_13144]]
** in-silico_annotation
+
** 5 reconstruction source(s) associated:
***ec-number
+
*** [[annotation-in-silico_annotation]]
* [[RXN-10773]]
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*** [[orthology-athaliana]]
** in-silico_annotation
+
*** [[annotation-experimental_annotation]]
***ec-number
+
*** [[orthology-synechocystis]]
* [[RXN-13602]]
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*** [[orthology-esiliculosus]]
** in-silico_annotation
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* [[ACETYLORNTRANSAM-RXN]]
***ec-number
+
** 1 associated gene(s):
* [[RXN-13603]]
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*** [[Tiso_gene_11231]]
** in-silico_annotation
+
** 4 reconstruction source(s) associated:
***ec-number
+
*** [[annotation-in-silico_annotation]]
* [[RXN-14179]]
+
*** [[orthology-creinhardtii]]
** in-silico_annotation
+
*** [[orthology-synechocystis]]
***ec-number
+
*** [[orthology-esiliculosus]]
* [[RXN-5341]]
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* [[ARGSUCCINLYA-RXN]]
** in-silico_annotation
+
** 1 associated gene(s):
***ec-number
+
*** [[Tiso_gene_2485]]
* [[RXN-8036]]
+
** 7 reconstruction source(s) associated:
** in-silico_annotation
+
*** [[annotation-experimental_annotation]]
***ec-number
+
*** [[orthology-esiliculosus]]
* [[RXN-9674]]
+
*** [[annotation-in-silico_annotation]]
** in-silico_annotation
+
*** [[orthology-athaliana]]
***ec-number
+
*** [[orthology-synechocystis]]
== Pathways associated ==
+
*** [[manual-primary_network]]
* [[PWY-3121]]
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*** [[orthology-creinhardtii]]
* [[PWY-6002]]
+
* [[ARGSUCCINSYN-RXN]]
* [[PWY-6788]]
+
** 1 associated gene(s):
* [[PWY-5176]]
+
*** [[Tiso_gene_12592]]
* [[PWY-7092]]
+
** 7 reconstruction source(s) associated:
* [[PWY-7091]]
+
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[CARBPSYN-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_4976]]
 +
*** [[Tiso_gene_4975]]
 +
*** [[Tiso_gene_4685]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[N-ACETYLGLUTPREDUCT-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_8102]]
 +
*** [[Tiso_gene_6700]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[N-ACETYLTRANSFER-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_11663]]
 +
*** [[Tiso_gene_5365]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=2.1.3.9-RXN 2.1.3.9-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7933 RXN-7933]
 
== External links  ==
 
== External links  ==
{{#set: left end position=3486}}
+
{{#set: taxonomic range=TAX-2}}
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=L-arginine biosynthesis III (via N-acetyl-L-citrulline)}}
{{#set: right end position=6380}}
+
{{#set: reaction found=7}}
{{#set: centisome position=54.571068    }}
+
{{#set: total reaction=9}}
{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
+
{{#set: completion rate=78.0}}
{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091}}
+

Latest revision as of 20:23, 21 March 2018

Pathway PWY-5154

  • taxonomic range:
  • common name:
    • L-arginine biosynthesis III (via N-acetyl-L-citrulline)
  • Synonym(s):

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links