Difference between revisions of "PWY-5386"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-363 RXN0-363] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside_hydrolase * ec num...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2681 PWY-2681] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-363 RXN0-363] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-2681 PWY-2681] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* common name:
 
* common name:
−
** nucleoside_hydrolase
+
** trans-zeatin biosynthesis
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.2.2.1 EC-3.2.2.1]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** trans-cytokinin biosynthesis
 +
** AMP-dependent cytokinin biosynthesis
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''11''' reactions in the full pathway
−
** 1 [[XANTHOSINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[XANTHINE]][c] '''+''' 1 [[D-Ribofuranose]][c]
+
* [[RXN-4303]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 xanthosine[c] '''+''' 1 H2O[c] '''=>''' 1 xanthine[c] '''+''' 1 D-ribofuranose[c]
+
*** [[Tiso_gene_3274]]
−
 
+
** 2 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[orthology-athaliana]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-esiliculosus]]
−
* [[Tiso_gene_11910]]
+
* [[RXN-4305]]
−
** IN-SILICO_ANNOTATION
+
** 1 associated gene(s):
−
***EC-NUMBER
+
*** [[Tiso_gene_3274]]
−
* [[Tiso_gene_12995]]
+
** 2 reconstruction source(s) associated:
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-athaliana]]
−
***EC-NUMBER
+
*** [[orthology-esiliculosus]]
−
== Pathways  ==
+
== Reaction(s) not found ==
−
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4304 RXN-4304]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4306 RXN-4306]
−
* [[PWY-6607]], guanosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6607 PWY-6607]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4307 RXN-4307]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4308 RXN-4308]
−
== Reconstruction information  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4310 RXN-4310]
−
* Category: [[annotation]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4312 RXN-4312]
−
** Source: [[annotation-in-silico_annotation]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4313 RXN-4313]
−
*** Tool: [[pathwaytools]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4314 RXN-4314]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-4317 RXN-4317]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ARACYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27994 27994]
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-2681 PWY-2681]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-3193}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02143 R02143]
+
{{#set: common name=trans-zeatin biosynthesis}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=trans-cytokinin biosynthesis|AMP-dependent cytokinin biosynthesis}}
−
{{#set: common name=nucleoside_hydrolase}}
+
{{#set: reaction found=2}}
−
{{#set: ec number=EC-3.2.2.1}}
+
{{#set: total reaction=11}}
−
{{#set: gene associated=Tiso_gene_11910|Tiso_gene_12995}}
+
{{#set: completion rate=18.0}}
−
{{#set: in pathway=PWY-6596|PWY-6607}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 16:06, 21 March 2018

Pathway PWY-2681

  • taxonomic range:
  • common name:
    • trans-zeatin biosynthesis
  • Synonym(s):
    • trans-cytokinin biosynthesis
    • AMP-dependent cytokinin biosynthesis

Reaction(s) found

2 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5386&oldid=32384"