Difference between revisions of "PWY-5386"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-363 RXN0-363] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside_hydrolase * ec num...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5386 PWY-5386] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-363 RXN0-363] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5386 PWY-5386] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** nucleoside_hydrolase
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** methylglyoxal degradation I
* ec number:
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** [http://enzyme.expasy.org/EC/3.2.2.1 EC-3.2.2.1]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
** 1 [[XANTHOSINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[XANTHINE]][c] '''+''' 1 [[D-Ribofuranose]][c]
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* [[GLYOXI-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1 xanthosine[c] '''+''' 1 H2O[c] '''=>''' 1 xanthine[c] '''+''' 1 D-ribofuranose[c]
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*** [[Tiso_gene_10185]]
 
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*** [[Tiso_gene_7507]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_19902]]
Genes have been associated with this reaction based on different elements listed below.
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** 4 reconstruction source(s) associated:
* [[Tiso_gene_11910]]
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*** [[annotation-in-silico_annotation]]
** IN-SILICO_ANNOTATION
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*** [[orthology-creinhardtii]]
***EC-NUMBER
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*** [[orthology-synechocystis]]
* [[Tiso_gene_12995]]
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*** [[orthology-esiliculosus]]
** IN-SILICO_ANNOTATION
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* [[GLYOXII-RXN]]
***EC-NUMBER
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** 5 associated gene(s):
== Pathways  ==
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*** [[Tiso_gene_10895]]
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
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*** [[Tiso_gene_5281]]
** '''8''' reactions found over '''8''' reactions in the full pathway
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*** [[Tiso_gene_19886]]
* [[PWY-6607]], guanosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6607 PWY-6607]
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*** [[Tiso_gene_12304]]
** '''3''' reactions found over '''4''' reactions in the full pathway
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*** [[Tiso_gene_10894]]
== Reconstruction information  ==
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** 5 reconstruction source(s) associated:
* Category: [[annotation]]
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*** [[annotation-experimental_annotation]]
** Source: [[annotation-in-silico_annotation]]
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*** [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGFAD-RXN DLACTDEHYDROGFAD-RXN]
 
== External links  ==
 
== External links  ==
* RHEA:
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* ECOCYC:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27994 27994]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5386 PWY-5386]
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33208}}
** [http://www.genome.jp/dbget-bin/www_bget?R02143 R02143]
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{{#set: taxonomic range=TAX-4751}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
{{#set: common name=nucleoside_hydrolase}}
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{{#set: common name=methylglyoxal degradation I}}
{{#set: ec number=EC-3.2.2.1}}
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{{#set: reaction found=2}}
{{#set: gene associated=Tiso_gene_11910|Tiso_gene_12995}}
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{{#set: total reaction=3}}
{{#set: in pathway=PWY-6596|PWY-6607}}
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{{#set: completion rate=67.0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:29, 21 March 2018

Pathway PWY-5386

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links