Difference between revisions of "PWY-5392"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7663 PWY-7663] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7663 PWY-7663] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
 
* common name:
 
* common name:
−
** gondoate biosynthesis (anaerobic)
+
** reductive TCA cycle II
 
* Synonym(s):
 
* Synonym(s):
−
** cis-11-icosenoate biosynthesis
+
** reductive tricarboxylic acid cycle
−
** (11Z)-icos-11-enoate biosynthesis
+
** reductive tricarboxylic acid pathway
−
** (11Z)-icosenoate biosynthesis
+
** reductive citric acid cycle
−
** gondoic acid biosynthesis
+
** reverse citric acid cycle
−
** 11-eicosenoic acid biosynthesis
+
** carbon fixation
 +
** CO2 fixation
 +
** reductive carboxylic acid cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''3''' reactions found over '''4''' reactions in the full pathway
+
  '''5''' reactions found over '''12''' reactions in the full pathway
−
* [[RXN-16629]]
+
* [[ACONITATEDEHYDR-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Tiso_gene_5939]]
+
*** [[Tiso_gene_13007]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
* [[ACONITATEHYDR-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_13007]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 +
* [[FUMHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_3691]]
 +
*** [[Tiso_gene_6720]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
* [[RXN-16630]]
+
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[MALATE-DEH-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Tiso_gene_9885]]
+
*** [[Tiso_gene_2323]]
−
*** [[Tiso_gene_13083]]
+
*** [[Tiso_gene_1990]]
−
** 2 reconstruction source(s) associated:
+
** 7 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
−
* [[RXN-16631]]
+
*** [[orthology-athaliana]]
−
** 1 associated gene(s):
+
*** [[orthology-synechocystis]]
−
*** [[Tiso_gene_6884]]
+
*** [[manual-primary_network]]
−
** 1 reconstruction source(s) associated:
+
*** [[orthology-creinhardtii]]
 +
* [[SUCCCOASYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_15846]]
 +
*** [[Tiso_gene_11866]]
 +
** 7 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16632 RXN-16632]
+
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=CITRATE--COA-LIGASE-RXN CITRATE--COA-LIGASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R23-RXN R23-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7929 RXN-7929]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8457 RXN-8457]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: taxonomic range=TAX-200783}}
−
{{#set: common name=gondoate biosynthesis (anaerobic)}}
+
{{#set: common name=reductive TCA cycle II}}
−
{{#set: common name=cis-11-icosenoate biosynthesis|(11Z)-icos-11-enoate biosynthesis|(11Z)-icosenoate biosynthesis|gondoic acid biosynthesis|11-eicosenoic acid biosynthesis}}
+
{{#set: common name=reductive tricarboxylic acid cycle|reductive tricarboxylic acid pathway|reductive citric acid cycle|reverse citric acid cycle|carbon fixation|CO2 fixation|reductive carboxylic acid cycle}}
−
{{#set: reaction found=3}}
+
{{#set: reaction found=5}}
−
{{#set: total reaction=4}}
+
{{#set: total reaction=12}}
−
{{#set: completion rate=75.0}}
+
{{#set: completion rate=42.0}}

Latest revision as of 20:20, 21 March 2018

Pathway PWY-5392

  • taxonomic range:
  • common name:
    • reductive TCA cycle II
  • Synonym(s):
    • reductive tricarboxylic acid cycle
    • reductive tricarboxylic acid pathway
    • reductive citric acid cycle
    • reverse citric acid cycle
    • carbon fixation
    • CO2 fixation
    • reductive carboxylic acid cycle

Reaction(s) found

5 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5392&oldid=40963"