Difference between revisions of "PWY-5427"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5427 PWY-5427] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5427 PWY-5427] ==
 
* taxonomic range:
 
* taxonomic range:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** chitin degradation to ethanol
+
** naphthalene degradation (aerobic)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
  '''4''' reactions found over '''6''' reactions in the full pathway
+
  '''1''' reactions found over '''6''' reactions in the full pathway
* [[1.1.1.39-RXN]]
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* [[1.2.1.65-RXN]]
** 3 associated gene(s):
+
** 0 associated gene:
*** [[Tiso_gene_12896]]
+
** 1 reconstruction source(s) associated:
*** [[Tiso_gene_6675]]
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*** [[Tiso_gene_12200]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
+
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
*** [[orthology-esiliculosus]]
 
* [[ACETATE--COA-LIGASE-RXN]]
 
** 3 associated gene(s):
 
*** [[Tiso_gene_3617]]
 
*** [[Tiso_gene_1612]]
 
*** [[Tiso_gene_3616]]
 
** 6 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
*** [[orthology-esiliculosus]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-synechocystis]]
 
*** [[manual-primary_network]]
 
*** [[orthology-creinhardtii]]
 
* [[ALCOHOL-DEHYDROG-RXN]]
 
** 6 associated gene(s):
 
*** [[Tiso_gene_18459]]
 
*** [[Tiso_gene_7649]]
 
*** [[Tiso_gene_6563]]
 
*** [[Tiso_gene_5424]]
 
*** [[Tiso_gene_5425]]
 
*** [[Tiso_gene_6562]]
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-synechocystis]]
 
* [[MALSYN-RXN]]
 
** 1 associated gene(s):
 
*** [[Tiso_gene_14377]]
 
** 3 reconstruction source(s) associated:
 
*** [[annotation-experimental_annotation]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[orthology-esiliculosus]]
 
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
* [http://metacyc.org/META/NEW-IMAGE?object=CHITIN-DEACETYLASE-RXN CHITIN-DEACETYLASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.3.1.29-RXN 1.3.1.29-RXN]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6161 RXN-6161]
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* [http://metacyc.org/META/NEW-IMAGE?object=NAPHTHALENE-12-DIOXYGENASE-RXN NAPHTHALENE-12-DIOXYGENASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8612 RXN-8612]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8615 RXN-8615]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXNN-386 RXNN-386]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-33154}}
+
* UM-BBD-PWY : naph
{{#set: common name=chitin degradation to ethanol}}
+
{{#set: taxonomic range=TAX-2}}
{{#set: reaction found=4}}
+
{{#set: common name=naphthalene degradation (aerobic)}}
 +
{{#set: reaction found=1}}
 
{{#set: total reaction=6}}
 
{{#set: total reaction=6}}
{{#set: completion rate=67.0}}
+
{{#set: completion rate=17.0}}

Latest revision as of 20:46, 21 March 2018

Pathway PWY-5427

  • taxonomic range:
  • common name:
    • naphthalene degradation (aerobic)
  • Synonym(s):

Reaction(s) found

1 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

  • UM-BBD-PWY : naph