Difference between revisions of "PWY-5480"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5468 RXN-5468] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5480 PWY-5480] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-30...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5468 RXN-5468] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5480 PWY-5480] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
−
* ec number:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
−
** [http://enzyme.expasy.org/EC/2.4.1.260 EC-2.4.1.260]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
* common name:
 +
** pyruvate fermentation to ethanol I
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''3''' reactions in the full pathway
−
** 1 [[CPD-5166]][c] '''+''' 1 [[CPD-171]][c] '''=>''' 1 [[CPD-5167]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[PROTON]][c]
+
* [[ACETALD-DEHYDROG-RXN]]
−
* With common name(s):
+
** 2 associated gene(s):
−
** 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl β-D-mannosyl phosphate[c] '''=>''' 1 α-D-Man-a-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl phosphate[c] '''+''' 1 H+[c]
+
*** [[Tiso_gene_7649]]
−
 
+
*** [[Tiso_gene_2052]]
−
== Genes associated with this reaction  ==
+
** 2 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_8232]]
+
*** [[orthology-creinhardtii]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[ALCOHOL-DEHYDROG-RXN]]
−
== Pathways  ==
+
** 6 associated gene(s):
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
+
*** [[Tiso_gene_18459]]
−
** '''19''' reactions found over '''19''' reactions in the full pathway
+
*** [[Tiso_gene_7649]]
−
== Reconstruction information  ==
+
*** [[Tiso_gene_6563]]
−
* Category: [[orthology]]
+
*** [[Tiso_gene_5424]]
−
** Source: [[orthology-esiliculosus]]
+
*** [[Tiso_gene_5425]]
−
*** Tool: [[pantograph]]
+
*** [[Tiso_gene_6562]]
−
* Category: [[annotation]]
+
** 2 reconstruction source(s) associated:
−
** Source: [[annotation-in-silico_annotation]]
+
*** [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** [[orthology-synechocystis]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PYRUVFORMLY-RXN PYRUVFORMLY-RXN]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-3041}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29538 29538]
+
{{#set: taxonomic range=TAX-4751}}
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R06260 R06260]
+
{{#set: common name=pyruvate fermentation to ethanol I}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction found=2}}
−
{{#set: ec number=EC-2.4.1.260}}
+
{{#set: total reaction=3}}
−
{{#set: gene associated=Tiso_gene_8232}}
+
{{#set: completion rate=67.0}}
−
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:08, 21 March 2018

Pathway PWY-5480

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5480&oldid=39756"