Difference between revisions of "PWY-5647"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSMANMUT-RXN PHOSMANMUT-RXN] == * direction: ** REVERSIBLE * common name: ** phosphomannomutase *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5647 PWY-5647] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSMANMUT-RXN PHOSMANMUT-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5647 PWY-5647] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** phosphomannomutase
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** 2-nitrobenzoate degradation I
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* ec number:
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** [http://enzyme.expasy.org/EC/5.4.2.8 EC-5.4.2.8]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''8''' reactions in the full pathway
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** 1 [[MANNOSE-1P]][c] '''<=>''' 1 [[CPD-15979]][c]
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* [[1.13.11.6-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 &alpha;-D-mannose 1-phosphate[c] '''<=>''' 1 D-mannopyranose 6-phosphate[c]
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*** [[Tiso_gene_10922]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* Gene: [[Tiso_gene_5802]]
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.32-RXN 1.2.1.32-RXN]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.77-RXN 4.1.1.77-RXN]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN]
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** Source: [[annotation-experimental_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5654 PWY-5654]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5654 PWY-5654]
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** Source: [[orthology-athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8846 RXN-8846]
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** Source: [[orthology-esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8847 RXN-8847]
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_13477]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_14704]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_4816]]
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** Source: [[orthology-synechocystis]]
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== Pathways  ==
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* [[PWY-7456]], &beta;-(1,4)-mannan degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7456 PWY-7456]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5659]], GDP-mannose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5659 PWY-5659]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7586]], &beta;-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7586 PWY-7586]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* UM-BBD-PWY : onb
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11140 11140]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: common name=2-nitrobenzoate degradation I}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01818 R01818]
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{{#set: reaction found=1}}
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* UNIPROT:
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{{#set: total reaction=8}}
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** [http://www.uniprot.org/uniprot/P26276 P26276]
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{{#set: completion rate=13.0}}
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** [http://www.uniprot.org/uniprot/P29955 P29955]
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** [http://www.uniprot.org/uniprot/P24175 P24175]
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** [http://www.uniprot.org/uniprot/P07283 P07283]
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** [http://www.uniprot.org/uniprot/P47723 P47723]
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** [http://www.uniprot.org/uniprot/Q57842 Q57842]
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** [http://www.uniprot.org/uniprot/P47299 P47299]
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** [http://www.uniprot.org/uniprot/Q59428 Q59428]
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** [http://www.uniprot.org/uniprot/Q06951 Q06951]
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** [http://www.uniprot.org/uniprot/Q49913 Q49913]
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** [http://www.uniprot.org/uniprot/P75050 P75050]
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** [http://www.uniprot.org/uniprot/Q51847 Q51847]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=phosphomannomutase}}
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{{#set: ec number=EC-5.4.2.8}}
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{{#set: gene associated=Tiso_gene_5802|Tiso_gene_13477|Tiso_gene_14704|Tiso_gene_4816}}
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{{#set: in pathway=PWY-7456|PWY-5659|PWY-882|PWY-7586}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:10, 21 March 2018

Pathway PWY-5647

  • taxonomic range:
  • common name:
    • 2-nitrobenzoate degradation I
  • Synonym(s):

Reaction(s) found

1 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links

  • UM-BBD-PWY : onb



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