Difference between revisions of "PWY-5754"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLU6PDEHYDROG-RXN GLU6PDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glucose-6-p...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5754 PWY-5754] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLU6PDEHYDROG-RXN GLU6PDEHYDROG-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5754 PWY-5754] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** glucose-6-phosphate_1-dehydrogenase
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** 4-hydroxybenzoate biosynthesis I (eukaryotes)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.49 EC-1.1.1.49]
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* Synonym(s):
 
* Synonym(s):
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** p-hydroxybenzoate biosynthesis I (eukaryotes)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''6''' reactions in the full pathway
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** 1 [[NADP]][c] '''+''' 1 [[D-glucopyranose-6-phosphate]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c]
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 NADP+[c] '''+''' 1 D-glucopyranose 6-phosphate[c] '''=>''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 6-phospho D-glucono-1,5-lactone[c]
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*** [[Tiso_gene_12275]]
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*** [[Tiso_gene_14183]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* Gene: [[Tiso_gene_16918]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[TYROSINE-AMINOTRANSFERASE-RXN]]
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*** Assignment: EC-NUMBER
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** 3 associated gene(s):
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* Gene: [[Tiso_gene_14877]]
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*** [[Tiso_gene_10680]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_6815]]
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*** Assignment: EC-NUMBER
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*** [[Tiso_gene_17718]]
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** Source: [[orthology-synechocystis]]
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** 3 reconstruction source(s) associated:
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** Source: [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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== Pathways  ==
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*** [[orthology-creinhardtii]]
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* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7268 PWY-7268]
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*** [[orthology-synechocystis]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reaction(s) not found ==
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=3.1.2.23-RXN 3.1.2.23-RXN]
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** '''14''' reactions found over '''18''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=HYDROXYPHENYLPYRUVATE-REDUCTASE-RXN HYDROXYPHENYLPYRUVATE-REDUCTASE-RXN]
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* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1118 RXN3O-1118]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1120 RXN3O-1120]
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* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and Entner-Doudoroff: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15841 15841]
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{{#set: common name=4-hydroxybenzoate biosynthesis I (eukaryotes)}}
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* LIGAND-RXN:
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{{#set: common name=p-hydroxybenzoate biosynthesis I (eukaryotes)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02736 R02736]
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{{#set: reaction found=2}}
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* UNIPROT:
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{{#set: total reaction=6}}
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** [http://www.uniprot.org/uniprot/P11411 P11411]
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{{#set: completion rate=33.0}}
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** [http://www.uniprot.org/uniprot/P12646 P12646]
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** [http://www.uniprot.org/uniprot/Q00612 Q00612]
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** [http://www.uniprot.org/uniprot/P54996 P54996]
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** [http://www.uniprot.org/uniprot/P21907 P21907]
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** [http://www.uniprot.org/uniprot/P54547 P54547]
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** [http://www.uniprot.org/uniprot/O51581 O51581]
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** [http://www.uniprot.org/uniprot/P0AC53 P0AC53]
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** [http://www.uniprot.org/uniprot/P11413 P11413]
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** [http://www.uniprot.org/uniprot/P29686 P29686]
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** [http://www.uniprot.org/uniprot/P44311 P44311]
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** [http://www.uniprot.org/uniprot/P56110 P56110]
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** [http://www.uniprot.org/uniprot/Q9JTW0 Q9JTW0]
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** [http://www.uniprot.org/uniprot/O25730 O25730]
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** [http://www.uniprot.org/uniprot/O51240 O51240]
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** [http://www.uniprot.org/uniprot/O66787 O66787]
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** [http://www.uniprot.org/uniprot/P05370 P05370]
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** [http://www.uniprot.org/uniprot/P11410 P11410]
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** [http://www.uniprot.org/uniprot/P11412 P11412]
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** [http://www.uniprot.org/uniprot/Q9R5T2 Q9R5T2]
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** [http://www.uniprot.org/uniprot/P48828 P48828]
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** [http://www.uniprot.org/uniprot/P37986 P37986]
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** [http://www.uniprot.org/uniprot/Q8IKU0 Q8IKU0]
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** [http://www.uniprot.org/uniprot/Q27741 Q27741]
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** [http://www.uniprot.org/uniprot/P48826 P48826]
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** [http://www.uniprot.org/uniprot/Q42919 Q42919]
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** [http://www.uniprot.org/uniprot/P37830 P37830]
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** [http://www.uniprot.org/uniprot/Q9FY99 Q9FY99]
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** [http://www.uniprot.org/uniprot/Q49700 Q49700]
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** [http://www.uniprot.org/uniprot/P73411 P73411]
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** [http://www.uniprot.org/uniprot/Q8L743 Q8L743]
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** [http://www.uniprot.org/uniprot/Q43793 Q43793]
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** [http://www.uniprot.org/uniprot/O65856 O65856]
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** [http://www.uniprot.org/uniprot/Q43839 Q43839]
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** [http://www.uniprot.org/uniprot/O81978 O81978]
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** [http://www.uniprot.org/uniprot/O24357 O24357]
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** [http://www.uniprot.org/uniprot/O24358 O24358]
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** [http://www.uniprot.org/uniprot/O24359 O24359]
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** [http://www.uniprot.org/uniprot/O22404 O22404]
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** [http://www.uniprot.org/uniprot/O22405 O22405]
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** [http://www.uniprot.org/uniprot/O22406 O22406]
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** [http://www.uniprot.org/uniprot/Q9FJI5 Q9FJI5]
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** [http://www.uniprot.org/uniprot/Q9LK23 Q9LK23]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glucose-6-phosphate_1-dehydrogenase}}
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{{#set: ec number=EC-1.1.1.49}}
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{{#set: gene associated=Tiso_gene_16918|Tiso_gene_14877}}
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{{#set: in pathway=PWY-7268|P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:48, 21 March 2018

Pathway PWY-5754

  • taxonomic range:
  • common name:
    • 4-hydroxybenzoate biosynthesis I (eukaryotes)
  • Synonym(s):
    • p-hydroxybenzoate biosynthesis I (eukaryotes)

Reaction(s) found

2 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5754&oldid=43836"