Difference between revisions of "PWY-5886"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-717 RXN-717] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With iden...")
(Created page with "Category:Gene == Gene Tiso_gene_6236 == * right end position: ** 2143 * transcription direction: ** POSITIVE * left end position: ** 1144 * centisome position: ** 9.218372...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-717 RXN-717] ==
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== Gene Tiso_gene_6236 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2143
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* transcription direction:
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** POSITIVE
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* left end position:
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** 1144
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* centisome position:
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** 9.218372   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[4-NITROPHENYLPHOSPHATASE-RXN]]
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** 1 [[Acceptor]][c] '''+''' 1 [[CPD-716]][c] '''=>''' 1 [[Donor-H2]][c] '''+''' 1 [[CPD-718]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[PSERPHOSPHA-RXN]]
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** 1 an oxidized electron acceptor[c] '''+''' 1 teasterone[c] '''=>''' 1 a reduced electron acceptor[c] '''+''' 1 3-dehydroteasterone[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_3577]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[RXN0-5114]]
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* [[Tiso_gene_8263]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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== Pathways  ==
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-699]], brassinosteroid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-699 PWY-699]
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*** Assignment: ec-number
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** '''11''' reactions found over '''25''' reactions in the full pathway
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** Source: [[orthology-athaliana]]
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[SERSYN-PWY]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=2143}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07444 R07444]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=1144}}
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{{#set: gene associated=Tiso_gene_3577|Tiso_gene_8263}}
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{{#set: centisome position=9.218372    }}
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{{#set: in pathway=PWY-699}}
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{{#set: reaction associated=4-NITROPHENYLPHOSPHATASE-RXN|PSERPHOSPHA-RXN|RXN0-5114}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=SERSYN-PWY}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 16:30, 21 March 2018

Gene Tiso_gene_6236

  • right end position:
    • 2143
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1144
  • centisome position:
    • 9.218372
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5886&oldid=34500"