Difference between revisions of "PWY-6174"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.52-RXN 3.5.1.52-RXN] == * direction: ** REVERSIBLE * common name: ** peptide-n4-(n-acetyl-bet...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.52-RXN 3.5.1.52-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174] ==
−
* direction:
+
* taxonomic range:
−
** REVERSIBLE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
−
** peptide-n4-(n-acetyl-beta-glucosaminyl)asparagine_amidase
+
** mevalonate pathway II (archaea)
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.5.1.52 EC-3.5.1.52]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** isoprenoid pathway
 +
** MVA pathway
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''5''' reactions found over '''7''' reactions in the full pathway
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-8541]][c] '''<=>''' 1 [[N-ACETYL-BETA-GLUCOSAMINYLAMINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Protein-L-Aspartates]][c]
+
* [[1.1.1.34-RXN]]
−
* With common name(s):
+
** 2 associated gene(s):
−
** 1 H2O[c] '''+''' 1 a [protein]-N4-(N-acetyl-&beta;-D-glucosaminyl)-L-asparagine[c] '''<=>''' 1 N-acetyl-&beta;-glucosaminylamine[c] '''+''' 1 H+[c] '''+''' 1 a [protein]-L-aspartate[c]
+
*** [[Tiso_gene_16182]]
−
 
+
*** [[Tiso_gene_17889]]
−
== Genes associated with this reaction  ==
+
** 1 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_18090]]
+
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
−
** IN-SILICO_ANNOTATION
+
** 3 associated gene(s):
−
***EC-NUMBER
+
*** [[Tiso_gene_16181]]
−
** EXPERIMENTAL_ANNOTATION
+
*** [[Tiso_gene_15327]]
−
***EC-NUMBER
+
*** [[Tiso_gene_17451]]
−
* [[Tiso_gene_18091]]
+
** 4 reconstruction source(s) associated:
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-athaliana]]
−
***EC-NUMBER
+
*** [[orthology-creinhardtii]]
−
== Pathways  ==
+
*** [[orthology-synechocystis]]
−
== Reconstruction information  ==
+
*** [[orthology-esiliculosus]]
−
* Category: [[annotation]]
+
* [[HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN]]
−
** Source: [[annotation-in-silico_annotation]]
+
** 3 associated gene(s):
−
*** Tool: [[pathwaytools]]
+
*** [[Tiso_gene_9236]]
−
** Source: [[annotation-experimental_annotation]]
+
*** [[Tiso_gene_14303]]
−
*** Tool: [[pathwaytools]]
+
*** [[Tiso_gene_8563]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[IPPISOM-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_8653]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[MEVALONATE-KINASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_3811]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10067 RXN-10067]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10068 RXN-10068]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
{{#set: taxonomic range=TAX-2157}}
−
** [http://www.uniprot.org/uniprot/P81898 P81898]
+
{{#set: common name=mevalonate pathway II (archaea)}}
−
** [http://www.uniprot.org/uniprot/P21163 P21163]
+
{{#set: common name=isoprenoid pathway|MVA pathway}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: reaction found=5}}
−
{{#set: common name=peptide-n4-(n-acetyl-beta-glucosaminyl)asparagine_amidase}}
+
{{#set: total reaction=7}}
−
{{#set: ec number=EC-3.5.1.52}}
+
{{#set: completion rate=71.0}}
−
{{#set: gene associated=Tiso_gene_18090|Tiso_gene_18091}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:12, 21 March 2018

Pathway PWY-6174

  • taxonomic range:
  • common name:
    • mevalonate pathway II (archaea)
  • Synonym(s):
    • isoprenoid pathway
    • MVA pathway

Reaction(s) found

5 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6174&oldid=40190"