Difference between revisions of "PWY-6281"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7784 RXN-7784] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroflavonol-4-reductase *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7784 RXN-7784] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
** dihydroflavonol-4-reductase
+
** L-selenocysteine biosynthesis II (archaea and eukaryotes)
* ec number:
+
** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''4''' reactions found over '''4''' reactions in the full pathway
** 1 [[CPD-7087]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-7088]][c] '''+''' 1 [[NADP]][c]
+
* [[2.7.9.3-RXN]]
* With common name(s):
+
** 3 associated gene(s):
** 1 (+)-dihydromyricetin[c] '''+''' 1 NADPH[c] '''+''' 2 H+[c] '''=>''' 1 (2R,3S,4S)-leucodelphinidin[c] '''+''' 1 NADP+[c]
+
*** [[Tiso_gene_5669]]
 
+
*** [[Tiso_gene_5668]]
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_14608]]
Genes have been associated with this reaction based on different elements listed below.
+
** 2 reconstruction source(s) associated:
* [[Tiso_gene_9504]]
+
*** [[annotation-in-silico_annotation]]
** IN-SILICO_ANNOTATION
+
*** [[orthology-esiliculosus]]
***AUTOMATED-NAME-MATCH
+
* [[RXN-10038]]
** [[pantograph]]-[[esiliculosus]]
+
** 0 associated gene:
* [[Tiso_gene_15272]]
+
** 1 reconstruction source(s) associated:
** [[pantograph]]-[[esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
* [[Tiso_gene_9503]]
+
* [[RXN-10039]]
** IN-SILICO_ANNOTATION
+
** 1 associated gene(s):
***AUTOMATED-NAME-MATCH
+
*** [[Tiso_gene_16385]]
* [[Tiso_gene_11016]]
+
** 2 reconstruction source(s) associated:
** [[pantograph]]-[[athaliana]]
+
*** [[annotation-in-silico_annotation]]
== Pathways  ==
+
*** [[orthology-esiliculosus]]
* [[PWY-5152]], leucodelphinidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5152 PWY-5152]
+
* [[RXN0-2161]]
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** 4 associated gene(s):
== Reconstruction information  ==
+
*** [[Tiso_gene_587]]
* [[orthology]]:
+
*** [[Tiso_gene_10015]]
** [[pantograph]]:
+
*** [[Tiso_gene_1682]]
*** [[athaliana]]
+
*** [[Tiso_gene_1684]]
*** [[esiliculosus]]
+
** 3 reconstruction source(s) associated:
* [[annotation]]:
+
*** [[annotation-in-silico_annotation]]
** [[pathwaytools]]:
+
*** [[annotation-experimental_annotation]]
*** [[in-silico_annotation]]
+
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
* LIGAND-MAP:
** [http://www.genome.jp/dbget-bin/www_bget?R05038 R05038]
+
** [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-2759}}
{{#set: common name=dihydroflavonol-4-reductase}}
+
{{#set: taxonomic range=TAX-2157}}
{{#set: ec number=EC-1.1.1.219}}
+
{{#set: common name=L-selenocysteine biosynthesis II (archaea and eukaryotes)}}
{{#set: gene associated=Tiso_gene_9504|Tiso_gene_15272|Tiso_gene_9503|Tiso_gene_11016}}
+
{{#set: reaction found=4}}
{{#set: in pathway=PWY-5152}}
+
{{#set: total reaction=4}}
{{#set: reconstruction category=orthology}}
+
{{#set: completion rate=100.0}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=athaliana|esiliculosus}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:09, 21 March 2018

Pathway PWY-6281

  • taxonomic range:
  • common name:
    • L-selenocysteine biosynthesis II (archaea and eukaryotes)
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links