Difference between revisions of "PWY-6505"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TCV3 TCV3] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With identifiers:...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6505 PWY-6505] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TCV3 TCV3] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6505 PWY-6505] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** L-tryptophan degradation XII (Geobacillus)
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''9''' reactions in the full pathway
** 1.0 [[NITRATE]][c] '''<=>''' 1.0 [[NITRATE]][v]
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* [[1.13.11.6-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1.0 nitrate[c] '''<=>''' 1.0 nitrate[v]
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*** [[Tiso_gene_10922]]
 
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** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-5162]]
* Gene: [[Tiso_gene_4747]]
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** 0 associated gene:
** Source: [[orthology-athaliana]]
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* [[TRPCAT-PWY]]
* Gene: [[Tiso_gene_1935]]
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** 0 associated gene:
** Source: [[orthology-athaliana]]
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== Reaction(s) not found ==
* Gene: [[Tiso_gene_15644]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5654 PWY-5654]
** Source: [[orthology-athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-5654 PWY-5654]
* Gene: [[Tiso_gene_8269]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
** Source: [[orthology-athaliana]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-2}}
{{#set: gene associated=Tiso_gene_4747|Tiso_gene_1935|Tiso_gene_15644|Tiso_gene_8269}}
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{{#set: common name=L-tryptophan degradation XII (Geobacillus)}}
{{#set: in pathway=}}
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{{#set: reaction found=3}}
{{#set: reconstruction category=orthology}}
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{{#set: total reaction=9}}
{{#set: reconstruction source=orthology-athaliana}}
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{{#set: completion rate=33.0}}
{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:42, 21 March 2018

Pathway PWY-6505

  • taxonomic range:
  • common name:
    • L-tryptophan degradation XII (Geobacillus)
  • Synonym(s):

Reaction(s) found

3 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links