Difference between revisions of "PWY-6545"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7248 PWY-7248] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5782 TAX-57...")
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7248 PWY-7248] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545] ==
 
* taxonomic range:
 
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5782 TAX-5782]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-10239 TAX-10239]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
−
** pectin degradation III
+
** pyrimidine deoxyribonucleotides de novo biosynthesis III
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''1''' reactions found over '''5''' reactions in the full pathway
+
  '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[GALACTUROISOM-RXN]]
+
* [[CDPREDUCT-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_10617]]
 +
*** [[Tiso_gene_9916]]
 +
*** [[Tiso_gene_9915]]
 +
*** [[Tiso_gene_10138]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[DCDPKIN-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_9290]]
 +
*** [[Tiso_gene_17271]]
 +
*** [[Tiso_gene_17272]]
 +
*** [[Tiso_gene_195]]
 +
*** [[Tiso_gene_18224]]
 +
*** [[Tiso_gene_16529]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[DTDPKIN-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_18224]]
 +
*** [[Tiso_gene_16529]]
 +
*** [[Tiso_gene_195]]
 +
*** [[Tiso_gene_17271]]
 +
*** [[Tiso_gene_17272]]
 +
*** [[Tiso_gene_9290]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[DTMPKI-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_3755]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[DUDPKIN-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_17272]]
 +
*** [[Tiso_gene_16529]]
 +
*** [[Tiso_gene_18224]]
 +
*** [[Tiso_gene_195]]
 +
*** [[Tiso_gene_9290]]
 +
*** [[Tiso_gene_17271]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[DUTP-PYROP-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Tiso_gene_19097]]
+
*** [[Tiso_gene_18793]]
−
*** [[Tiso_gene_8329]]
+
*** [[Tiso_gene_18792]]
−
** 1 reconstruction source(s) associated:
+
** 3 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
* [[RXN-12195]]
 +
** 101 associated gene(s):
 +
*** [[Tiso_gene_1960]]
 +
*** [[Tiso_gene_11098]]
 +
*** [[Tiso_gene_12899]]
 +
*** [[Tiso_gene_2924]]
 +
*** [[Tiso_gene_14226]]
 +
*** [[Tiso_gene_674]]
 +
*** [[Tiso_gene_8601]]
 +
*** [[Tiso_gene_8584]]
 +
*** [[Tiso_gene_9959]]
 +
*** [[Tiso_gene_2929]]
 +
*** [[Tiso_gene_9423]]
 +
*** [[Tiso_gene_873]]
 +
*** [[Tiso_gene_8763]]
 +
*** [[Tiso_gene_9004]]
 +
*** [[Tiso_gene_14816]]
 +
*** [[Tiso_gene_5529]]
 +
*** [[Tiso_gene_4192]]
 +
*** [[Tiso_gene_8859]]
 +
*** [[Tiso_gene_14227]]
 +
*** [[Tiso_gene_9234]]
 +
*** [[Tiso_gene_38]]
 +
*** [[Tiso_gene_2889]]
 +
*** [[Tiso_gene_4194]]
 +
*** [[Tiso_gene_15043]]
 +
*** [[Tiso_gene_537]]
 +
*** [[Tiso_gene_4026]]
 +
*** [[Tiso_gene_14646]]
 +
*** [[Tiso_gene_195]]
 +
*** [[Tiso_gene_3653]]
 +
*** [[Tiso_gene_1444]]
 +
*** [[Tiso_gene_8949]]
 +
*** [[Tiso_gene_17616]]
 +
*** [[Tiso_gene_546]]
 +
*** [[Tiso_gene_13738]]
 +
*** [[Tiso_gene_538]]
 +
*** [[Tiso_gene_2449]]
 +
*** [[Tiso_gene_1959]]
 +
*** [[Tiso_gene_7387]]
 +
*** [[Tiso_gene_2447]]
 +
*** [[Tiso_gene_20353]]
 +
*** [[Tiso_gene_5166]]
 +
*** [[Tiso_gene_4596]]
 +
*** [[Tiso_gene_2448]]
 +
*** [[Tiso_gene_5525]]
 +
*** [[Tiso_gene_12148]]
 +
*** [[Tiso_gene_20327]]
 +
*** [[Tiso_gene_11012]]
 +
*** [[Tiso_gene_2176]]
 +
*** [[Tiso_gene_13325]]
 +
*** [[Tiso_gene_13268]]
 +
*** [[Tiso_gene_12149]]
 +
*** [[Tiso_gene_2451]]
 +
*** [[Tiso_gene_6614]]
 +
*** [[Tiso_gene_2897]]
 +
*** [[Tiso_gene_4436]]
 +
*** [[Tiso_gene_623]]
 +
*** [[Tiso_gene_9926]]
 +
*** [[Tiso_gene_6181]]
 +
*** [[Tiso_gene_16478]]
 +
*** [[Tiso_gene_6180]]
 +
*** [[Tiso_gene_1984]]
 +
*** [[Tiso_gene_2452]]
 +
*** [[Tiso_gene_15465]]
 +
*** [[Tiso_gene_4092]]
 +
*** [[Tiso_gene_7745]]
 +
*** [[Tiso_gene_829]]
 +
*** [[Tiso_gene_250]]
 +
*** [[Tiso_gene_1541]]
 +
*** [[Tiso_gene_199]]
 +
*** [[Tiso_gene_7123]]
 +
*** [[Tiso_gene_10282]]
 +
*** [[Tiso_gene_9114]]
 +
*** [[Tiso_gene_2450]]
 +
*** [[Tiso_gene_14474]]
 +
*** [[Tiso_gene_8461]]
 +
*** [[Tiso_gene_4437]]
 +
*** [[Tiso_gene_4726]]
 +
*** [[Tiso_gene_9659]]
 +
*** [[Tiso_gene_8950]]
 +
*** [[Tiso_gene_2068]]
 +
*** [[Tiso_gene_9243]]
 +
*** [[Tiso_gene_13264]]
 +
*** [[Tiso_gene_4330]]
 +
*** [[Tiso_gene_13681]]
 +
*** [[Tiso_gene_1610]]
 +
*** [[Tiso_gene_13653]]
 +
*** [[Tiso_gene_17449]]
 +
*** [[Tiso_gene_10221]]
 +
*** [[Tiso_gene_19098]]
 +
*** [[Tiso_gene_4155]]
 +
*** [[Tiso_gene_8164]]
 +
*** [[Tiso_gene_19350]]
 +
*** [[Tiso_gene_2631]]
 +
*** [[Tiso_gene_17751]]
 +
*** [[Tiso_gene_1611]]
 +
*** [[Tiso_gene_3287]]
 +
*** [[Tiso_gene_7734]]
 +
*** [[Tiso_gene_572]]
 +
*** [[Tiso_gene_1291]]
 +
*** [[Tiso_gene_14239]]
 +
*** [[Tiso_gene_8860]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[UDPREDUCT-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_9915]]
 +
*** [[Tiso_gene_9916]]
 +
*** [[Tiso_gene_10138]]
 +
*** [[Tiso_gene_10617]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=GALACTURAN-14-ALPHA-GALACTURONIDASE-RXN GALACTURAN-14-ALPHA-GALACTURONIDASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8850 RXN-8850]
−
* [http://metacyc.org/META/NEW-IMAGE?object=PECTINESTERASE-RXN PECTINESTERASE-RXN]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14362 RXN-14362]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14753 RXN-14753]
+
 
== External links  ==
 
== External links  ==
 +
* LIGAND-MAP:
 +
** [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
{{#set: taxonomic range=TAX-5782}}
 +
{{#set: taxonomic range=TAX-10239}}
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=pectin degradation III}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: reaction found=1}}
+
{{#set: common name=pyrimidine deoxyribonucleotides de novo biosynthesis III}}
−
{{#set: total reaction=5}}
+
{{#set: reaction found=8}}
−
{{#set: completion rate=20.0}}
+
{{#set: total reaction=9}}
 +
{{#set: completion rate=89.0}}

Latest revision as of 20:19, 21 March 2018

Pathway PWY-6545

Reaction(s) found

8 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6545&oldid=40838"